Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04576 ATGTCGGGGCAAACACAACGTCTGAATGTGGTCCCCACAGTGACGATGCTGGGAGTGGTGAAAGCTCGTTTGGTGGGAGCTACAAGAGGTCATGCCCTTCTGAAGAAGAAGAGTGATGCTCTCACCGTGCAGTTCAGGCAGATCCTGAAGAAGATCGTGTCCACCAAGGAATCAATGGGTGACATCATGAAGACCTCTTCTTTCGCCTTGACTGAGGCCAAGTATGTTGCTGGTGACAACATCAAGCATGTTGTGCTTGAGAATGTTAAAGAAGCTTCCCTCCGAGTCCGCTCTCGCCAAGAGAATGTTGCCGGAGTTAAGCTTCCCAAGTTTGATTACACTGCAGATGGTGAGGCCACCAAGAATGACCTCACTGGATTGGCAAGGGGTGGCCAGCAGGTGCAGCAGTGCCGTGCTGCTTACATCAAGGCAATTGAGGTTCTTGTTGAGCTTGCTTCCCTTCAAACCTCTTTCCTCACCCTTGATGAGGCCATCAAGACCACCAACCGTAGGGTCAATGCTCTTGAGAATGTGGTTAAGCCAAGGCTTGAGAACACCATTAGTTACATCAAGGGTGAGTTGGATGAGCTTGAGAGAGAGGATTTCTTTAGGTTGAAGAAGATTCAGGGATATAAGAAGAGGGAAATTGAGAGGCAGATGCAGTTGCAGGCTACCAAGGAACAGCTTGGTGACAAATTCCCTTTGCACAAAGGGGTTTCCTTCAATTCTCAAAACTTGTTGTCTGTGGCAGACAAGGATGATGATATCATTTTCTGA 777 0.4826 MSGQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRQENVAGVKLPKFDYTADGEATKNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQMQLQATKEQLGDKFPLHKGVSFNSQNLLSVADKDDDIIF. 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04576 258 NCBIfam V-type ATP synthase subunit D 9 213 IPR002699 GO:0046961
Seca2g04576 258 Pfam ATP synthase subunit D 18 209 IPR002699 GO:0046961
Seca2g04576 258 FunFam V-type proton ATPase subunit D 1 199 - -
Seca2g04576 258 Coils Coil 180 200 - -
Seca2g04576 258 Gene3D - 1 199 - -
Seca2g04576 258 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 258 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04576 Seca-Chr2 131870956 131871732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04576 1 258 Primary Pumps ATPases(2) AT3G58730 77.863 6.56e-147 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04576 K02149 - gmx:100808847 450.669