Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04569 ATGGCAACTGCTGTGCAAGAAGTTCGTGTTCCCCCATTAACTTCCACCTCCGACCCACCTCCTCTTTTTGATGGAACCACGAGGTTGTACATCAGTTATGTTTGTCCCTATGCACAACGTGTATGGATCGCTAGGAACTATAAGGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTTCAAAACAGGCCTGCTTGGTATAAGGAGAAAGTCTACCCTGAAAACAAGGTGCCTTCGTTGGAACACAATGGGAAGGTCTTGGGAGAAAGTCTTGATTTGATCAATTATGTAGATGTTAACTTCGAAGGGCCATCTCTAGCTCCCAGTGATCCTGCCAAGAAAGAGTTTGGTGGGCAGTTGATTTCTCATGTTGATACATTCACCAAAGACCTGTACTCTTCATTGAAAGGAGATCATCCTATACAACAAGCCAGTTCTGCCTTTGATTACTTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCATTCCTTCTTGGTCACTTTAGTTGGGTGGATATTGCCTATATTCCATTTGTTGAAAGATTCCATATCGTTTTTGCTGAGGTGTTCAAGCATGATGTAACGGAAGGAAGGCCTAAATTTGCAGCATGGATTGAGGAGGTGAACAAGATTGATGCTTATACACAGACCAGAGTTGATCCTAAAGAAATCGTTGATATTTTCAAGAAACGTTTTTTGGTTCAAATTGGGACTAACACATGCCCAGTACAAGTTGCATCGCCAATCAGCCCAATCTGTACACTTCCCAAGAAGACGAAATCTGGCCACAACATATATATATTGGAGACTTCCTTGGTTGAAAAAGCTACAGACTCAGCTTAA 846 0.422 MATAVQEVRVPPLTSTSDPPPLFDGTTRLYISYVCPYAQRVWIARNYKGLQDKIKLVPIDLQNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLINYVDVNFEGPSLAPSDPAKKEFGGQLISHVDTFTKDLYSSLKGDHPIQQASSAFDYLENALGKFDDGPFLLGHFSWVDIAYIPFVERFHIVFAEVFKHDVTEGRPKFAAWIEEVNKIDAYTQTRVDPKEIVDIFKKRFLVQIGTNTCPVQVASPISPICTLPKKTKSGHNIYILETSLVEKATDSA. 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04569 281 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
Seca2g04569 281 Pfam Glutathione S-transferase, C-terminal domain 143 207 - -
Seca2g04569 281 SUPERFAMILY GST C-terminal domain-like 102 233 IPR036282 -
Seca2g04569 281 CDD GST_C_Lambda 111 230 - -
Seca2g04569 281 SFLD Glutathione Transferase (cytosolic) 28 210 IPR040079 -
Seca2g04569 281 Pfam Glutathione S-transferase, N-terminal domain 29 105 IPR004045 -
Seca2g04569 281 SUPERFAMILY Thioredoxin-like 19 106 IPR036249 -
Seca2g04569 281 Gene3D - 104 237 - -
Seca2g04569 281 PANTHER GLUTATHIONE S-TRANSFERASE L1 3 233 IPR044629 GO:0004364
Seca2g04569 281 SFLD Main (cytGST) 28 210 - -
Seca2g04569 281 FunFam Glutathione S-transferase L2, chloroplastic 1 103 - -
Seca2g04569 281 FunFam Lambda class glutathione S-transferase 104 236 - -
Seca2g04569 281 Gene3D Glutaredoxin 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04569 Seca-Chr2 131803048 131806917 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04569 7 234 Glutathione S-transferase Gene Family AT5G02790 69.298 7.67e-119 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04569 K00799 - gmx:100793025 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04569 2 131803048 131806917 Seca2g04569 2 131803048 131806917 ECH
Seca2g04569 2 131803048 131806917 Seca2g04569 2 131803048 131806917 PCT