Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04568 ATGGATACACTGAGTGAAGAAATTTTGTATAATATGATGGATAAAGCAAATTTGAATAATTCTGACTCTGGGAAATTAAGAAATTCTAAATCGAGTGATAAAGATAATGGTCATAGTCAAAACTTACCAGAAGGATTCGCTGTTAGGAAAGGTGATGTTTATCGGGATCGCAATAATTTGATTAGAATGAGGCAAATGGTGTGTAACAGGCAAGGGGAGAGAAGTGAAAAACATTTAAATAGAACTGATAGAATTAGGGTGGCAAAAGCTATTACACGTACTAAATGTCATGCAAGGATTAGGGTTCATTTAGATTATAAGACTAGGAAGTGGAGGGTAGGGTTGTTTGAGCCAAATCACAATCATGACCTGACTCCTGCCAATATGGTGCATTTGCTACCTGCATATCGTGGTTTGAGTGTTGGTGATAAAGCTCAAGTTGAAAGCCTTCACTTATATGGTGTTAGGACATGCCATATAATTGGGTTAATTATGGGTCAGAAGGGTGGATATTCTGATCTGGGTTTCTGCAAGAAGGATTTGTATAATCATATTGATAAGCAGAATAGAGGAAAAATAGGGGATGCCTGTAATAGCCTCAGGAATGTAGTAGATAATAGTCCATACCACTTTGTAAGAAACATTGAAAGAATTCACAAGTTGGCTGATGAAATTGAAAGGGAGGATGGTGGTGAAATTAAAAATGGAGATATATCAAAGATTACATTTCCTGATGTGGAATCATCCGAGCATGGGGTTACAGGTTCTTTGCATCATATTAGTGCATCTGACAAAGTGAAATATCCTGAGATGGAGCACAAGGGTCTTGGTCTTAGAAATTTATCGGTTGACAATATTGGGTGTGCATTGGGTAATCAAACTCAATTGTCAATGATGAACCCTACAAGCATGTCTGGTCATATGAACTTCAGACCATCAATGATGCAAGGTTTTGGTCAGGGTTTTATGGGTAGTAGGGTTAATTATATCCCAAATTATCCTCAGTTGCATATGCCAAATTATCATCAAATGCATATGCATCAAGCAGTATACGGTTATTCAATGTATCTAGGGATGAATGCAATTGGTAATTATTCACAGTTTACAAACACTCTAAAGGAGATTGAGAGGAACGCAGTTGTTGGAAAAATGGGCTTCAATCCTGCTGGTGGACAACATTGA 1182 0.3739 MDTLSEEILYNMMDKANLNNSDSGKLRNSKSSDKDNGHSQNLPEGFAVRKGDVYRDRNNLIRMRQMVCNRQGERSEKHLNRTDRIRVAKAITRTKCHARIRVHLDYKTRKWRVGLFEPNHNHDLTPANMVHLLPAYRGLSVGDKAQVESLHLYGVRTCHIIGLIMGQKGGYSDLGFCKKDLYNHIDKQNRGKIGDACNSLRNVVDNSPYHFVRNIERIHKLADEIEREDGGEIKNGDISKITFPDVESSEHGVTGSLHHISASDKVKYPEMEHKGLGLRNLSVDNIGCALGNQTQLSMMNPTSMSGHMNFRPSMMQGFGQGFMGSRVNYIPNYPQLHMPNYHQMHMHQAVYGYSMYLGMNAIGNYSQFTNTLKEIERNAVVGKMGFNPAGGQH. 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04568 393 PANTHER OS01G0519700 PROTEIN 44 202 - -
Seca2g04568 393 Pfam FAR1 DNA-binding domain 45 125 IPR004330 -
Seca2g04568 393 MobiDBLite consensus disorder prediction 17 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04568 Seca-Chr2 131793197 131796349 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g04568 FAR1 2.3e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04568 - - ccaj:109792835 187.963