Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04567 ATGGCAACTGCTGTGCAAGAAATTCGTCCTCCCACGTTGTCTCCCACCTCCGAACCACCACCCATCTTTGATGGAACAACCAGGTTGTACATGAGTTACTCATGCCCATTTGCACAACGCGTATGGATCACTAGGAACCACAAGGGATTGCAAGACAAGATCAGATTGGTTCCTATTGACCTTCAAAACAAACCTGCTTGGTACAAAGAGAAGGTCCACCCGGAAAATAAGGTACCATCTCTGGAACATGATGGCAAGGTTTTAGCAGAAAGTATTGACTTGATCAAATACTTAGATGCAACTTTTGATGGGCCATCGCTAATGCCTGATGACCCTGCTAAGAAGGAATATGGTGAGGAGCTGATAAAGTATGTTGATACTTTTACCAAAGATTTGTTTGGTTCGTTCAGGGGCGATCCCATAACGCAAACCAGTGCTTCATTTGACTATGTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCCTTCTTCCTTGGCGAATTTAGTTTGGTGGATATTACCTATATTCCATTTGTTGAAAGGTTCCGAAACGTCTTCTCCGAGATATATAAGCATGATATCACAGCTGGAAGGCCTAAACTAGCAGCATCGCTTGAGGAGCTGAACAATAACAATGCTTACAAGCAGACCAAACCTGATCCACAAGAGTTCGTTGACTTTGTCAAGAAGCGCTTCTTGGGTCAGTAG 708 0.4379 MATAVQEIRPPTLSPTSEPPPIFDGTTRLYMSYSCPFAQRVWITRNHKGLQDKIRLVPIDLQNKPAWYKEKVHPENKVPSLEHDGKVLAESIDLIKYLDATFDGPSLMPDDPAKKEYGEELIKYVDTFTKDLFGSFRGDPITQTSASFDYVENALGKFDDGPFFLGEFSLVDITYIPFVERFRNVFSEIYKHDITAGRPKLAASLEELNNNNAYKQTKPDPQEFVDFVKKRFLGQ. 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04567 235 SFLD Glutathione Transferase (cytosolic) 28 203 IPR040079 -
Seca2g04567 235 FunFam Glutathione S-transferase L2, chloroplastic 1 103 - -
Seca2g04567 235 PANTHER GLUTATHIONE S-TRANSFERASE L1 3 232 IPR044629 GO:0004364
Seca2g04567 235 SFLD Main (cytGST) 28 203 - -
Seca2g04567 235 MobiDBLite consensus disorder prediction 1 21 - -
Seca2g04567 235 Pfam Glutathione S-transferase, C-terminal domain 143 203 - -
Seca2g04567 235 Gene3D - 104 235 - -
Seca2g04567 235 SUPERFAMILY Thioredoxin-like 18 107 IPR036249 -
Seca2g04567 235 FunFam Lambda class glutathione S-transferase 104 235 - -
Seca2g04567 235 Pfam Glutathione S-transferase, N-terminal domain 29 105 IPR004045 -
Seca2g04567 235 Gene3D Glutaredoxin 1 103 - -
Seca2g04567 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
Seca2g04567 235 SUPERFAMILY GST C-terminal domain-like 101 232 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04567 Seca-Chr2 131787038 131789871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04567 7 233 Glutathione S-transferase Gene Family AT5G02790 65.639 1.13e-113 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04567 K00799 - gmx:100793025 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05440 8 145423732 145425879 Seca2g04567 2 131787038 131789871 PCT