Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04540 ATGAGAAAACTCTGCTTTAACCCCAAGACGCCGTCGTTTTCCATAGCTCGCCATTCTCTATCTTTGCCTGCTCCCTCAAGTTCAACCTCAAGTCCAATAACTCCACGGCTGAGCCTTCCTGACCCTAGGAGCAGCAACGAAGAGAGATGCATCGAAGAAGCAGAGGCACTGATACTGAAATGGAACGCAGAGAGCTCTGCATACGCCAAAGTAACCTCTCTATTCTACGAAGATAAAAACGAAGCTAAGCAATACATCAATTGCGTTAACCAGCTTCAGAAAGCCATGCATTCCTTGCTCTCTCAGAATCCTTCCTCCGAGAAACTCATCCTCGCTCATAACCTCATGCAAATGGCCATGAAAAGGCTCAAAAAAGAGCTCTATCAAATATTATCCATGAACCGTGCCTACCTTGACCCCGAATCCGTCTCCGTCAGATCTTCCCGCACCTCTGTGCACTCCAACACCTCTGACTACGACGACGATTTCACGGCAGAAGACGACGTTATCGCCGCCGGTGATTCAATCTCGGAAGTCGAACAGGTTTCTTCCATTGCCATGGCGGATCTGAAATCCATCGCTGACTGCATGATCTCCTCTGGTTACGCAAAAGAATGCGTAAGCGTCTACAACTCCATCCGAAAATCCATCATTGACGAAGGCATTTATCGCCTCAACGTGGAGAAACTGAGCTCCTCGCGCGTCAATAAGATGGATTGGGAAGTTCTTGAGTTGAAGATCAAGAGTTGGTTAGAGGCAGTGAGGATTTCAGTTAGGACGCTCTTCAACGGAGAGAGAATCCTCTGCGATCACGTCTTCGGTTCTTCAGAGTCCATCAGAGAAGCTTGCTTCGCAGAGATTTCAAGGGACGGTGCCTCTCTTCTTTTCGGATTCCCTGAACTCGTCGCCAAAACCAAGAAATCCCCGCCGGAGAAGATGTTCCGCGTGCTCGATATGTACACCGTGATAACTGCTCTGTGGCCGGAGATCGAATCAATCTTCTCTTCAGATTCCACCTCCACCTCCGCCATTCGATCTCAAGTCCTCGCTTCGCTTGAACGACTCACCGAGTCGGTGCAAACAATGCTCTCGGAATTTGAATCGACGATCCATAAAGACGCTTCCAGGTTGCCGATGAACGGCGGCGGAGTGCACTCACTCACGATTCAGACGATGAATTACTTATCAATCCTCGCCGACTACAACAACGCGCTCTCTGACATATTCCTGCGATCGGACTCGCCTCCTCCGCCAAAGTCGTCGTCGCTGCCGGATTCTTACTTATACAGTCCAGAATCCGACGATTCGACGGCGCCGGCACTGACGGCACGTTTCGCGTGGTTGATTCTCGTGCTCCTTTGTAAGCTCGACAGCAAAGCAAAGCATTTGAAGGATGTTTCGCTGTCTTACTTGTTTCTAGCGAACAATCTCCGGCACGTGGTGGCGAGAGTCCGCAGCTCGAATCTGCTGTATGTGCTGGGCGAAGATTGGGTTGTGAAGCACGAAGCCAAGGTGAAACGGTTCGTTGCGAACTACGAGAGGGTGGCGTGGGGGCCAGTGGTTGAGTCTTTGCCGGAAAATCCAACTGCGGCGGATGCGAGGGTGGTGTTTGAGAACTTCAATTTCAGATTCGAAGAAGCGTATCGGAAACAGAATTTGTTTGTCGTAGCTGACAGAGAACTGCGAGACGAAATAAAGGGATCGATCGCGAGAAAAATAGTGCCGAGATATAGCGAGTGGTATAATATGCTGCTTGCTACGGTGGGATCGGTGAGGGACATGACGAGGATGGAGTATGTCAATTTTACCCCTGAAGATGTTGATAGTTACCTGGCCAACCTCTTCTTTTTCGGAACAAGCTCAGCTGGCGTGTCGTCGTCTTCGTCGTCAGTAACTTCGTCCCCTCACCGGCGACGGAGTTAA 1923 0.5018 MRKLCFNPKTPSFSIARHSLSLPAPSSSTSSPITPRLSLPDPRSSNEERCIEEAEALILKWNAESSAYAKVTSLFYEDKNEAKQYINCVNQLQKAMHSLLSQNPSSEKLILAHNLMQMAMKRLKKELYQILSMNRAYLDPESVSVRSSRTSVHSNTSDYDDDFTAEDDVIAAGDSISEVEQVSSIAMADLKSIADCMISSGYAKECVSVYNSIRKSIIDEGIYRLNVEKLSSSRVNKMDWEVLELKIKSWLEAVRISVRTLFNGERILCDHVFGSSESIREACFAEISRDGASLLFGFPELVAKTKKSPPEKMFRVLDMYTVITALWPEIESIFSSDSTSTSAIRSQVLASLERLTESVQTMLSEFESTIHKDASRLPMNGGGVHSLTIQTMNYLSILADYNNALSDIFLRSDSPPPPKSSSLPDSYLYSPESDDSTAPALTARFAWLILVLLCKLDSKAKHLKDVSLSYLFLANNLRHVVARVRSSNLLYVLGEDWVVKHEAKVKRFVANYERVAWGPVVESLPENPTAADARVVFENFNFRFEEAYRKQNLFVVADRELRDEIKGSIARKIVPRYSEWYNMLLATVGSVRDMTRMEYVNFTPEDVDSYLANLFFFGTSSAGVSSSSSSVTSSPHRRRS. 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04540 640 MobiDBLite consensus disorder prediction 22 45 - -
Seca2g04540 640 PANTHER EXOCYST COMPLEX PROTEIN EXO70 44 615 IPR004140 GO:0000145|GO:0006887
Seca2g04540 640 Pfam Exo70 exocyst complex subunit 248 612 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca2g04540 640 SUPERFAMILY Cullin repeat-like 52 615 IPR016159 -
Seca2g04540 640 Gene3D Exocyst complex component Exo70 58 621 - -
Seca2g04540 640 MobiDBLite consensus disorder prediction 22 41 - -
Seca2g04540 640 MobiDBLite consensus disorder prediction 621 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04540 Seca-Chr2 131280990 131282912 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04540 51 615 EXO70 exocyst subunit family AT3G09520 57.465 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04540 K07195 - gmx:100810548 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04540 2 131280990 131282912 Seca2g04540 2 131280990 131282912 ECH
Seca2g04540 2 131280990 131282912 Seca2g04540 2 131280990 131282912 PCT