Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04534 ATGCAGAGACTCAAAGGAAGCAAGCAGGTTCGTCGACATAGAAAACAGAAGAGTTTTCCTTCCGATTCTGGTTCTTGTGGTAGTGGAGTAGCAGATGAAGATGCGAATTCATTTCAATTGGGATGGAGATCTTCGAAACAACAGTTGGGAACTCCCATGAAGAAGTTATTAGCTGCAGAGATGTCCCGAGAAACTGAATCCAAAAGAAGAGCCCCTAGTGTTATTGCCAGATTAATGGGTCTTGATGGGCTTCCGTTGCAGTTGCCTAAGCAACATACGGGTTCCTCAGAAAACCATCTAAAGGCGTCAACACAAGTAGGGAAAACTCGAAGCAGTGGTACATTATATGATGGTCGATCATCTAGGAGAAGCTCAAAGGATCAGCAAGAGTTTAAGGATGTATTTGAGGTCTCTGAGATCCCAAAGGCACAGAGTAGTAGGTATGCGTCGCAGGGGCCTGTGGACTTGAAGATCAGTGATGATGAAATGTCATTCATTGAACAAAAGTTCATGGATACCAAACGCCTTGCTACTTATCAGGATTTACAGTCTTCACAGGATTCCCATGATACACTAGAGATCCTAGACTCTAACAATGATCTTCTGCAAAAATACTTTAAGCGGCCTGATTCTTTGTTTAAGAAGCATCTAGATGATCTGCAAGCTGCCCCACTCCAATCAAATTTTTGTCATGTAGAAGCTATGAAATCAGATAGGGAGAGGACGGGGTTGAATTACAATGGATCTCATCAGAAGCATCGGGATGGTTTTTCTAACCGTTTTGATAGAAGACATGCAATGCATATTTCACCAAAATCTTCAAAGCTTCAGTTTAAGGGAAGAGACGAACCTGATGCAGCCCCAACTAGGATTGTTGTCCTAAAACCTAATCTTGGAAAAGTGCAGGATGCTACCAAATTTGTTTCATCACCTTGTTCTTCACATACTTTTCTGTCTGAGTTTGGAGAGCATGCTGAATTTTCAGATATCAGATTTAGGGACAATGAACTGAATCAAAAGAAAAATTTTCCCGGTACTGCCAGTGCTAGGCATTCAAGGCAAAATTCTTGGGAATCCAGAGAAATTGCAAAGGAAATCACTAGCCAAATGAAAAATAGTCTGAATAATAGTTCCATGATATTTTCATCTTCTAGATTTAGAGGATATTCTTGGGATGGTAGCTCATGTAGTTTTTCTGGAAATGAATCTCCAGAGGAATCAGAGGTAACAACTGCAATTCTGGAAAATTCGCTTGACATGAGTAATACTCTCAGGCCATCATCCCATTGCGGTGAATCATCTGTTAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGTCGCACAAGTCTCAACAAGGCCAATCCATCTGCAGGAGCAACACACTGGCTGAAATGCTTGCTATCCCTGACAAGGAAATGAAAGCAGCTAACTTTGATAGCACCTCTCGTGGCGAAGTTTTCCATAATAAAGTTGCTAGCAATGGTAAACCTGCTGGGTTGGCTGAACCAGTAGGTATCAGCAGCAGGGATGGTTGGAAGGATGGATTTATTGGAAGTTTACCAAGGTCAAAGTCTCTTCCTGCTTCATCTACTGTCTTTGGAAGTCCCAGAGCAATCTTGCGCCATGAAGCACTTCGTGATGATCGATTTATGATGCCAAAGGAAGCCTTTAAACGGGAAAGGAAAAAGGTGGTGAAATGTCTTGATCAGAGACGGTGTGTGAATAGCAGAAGCTCAAAATCTGGTCGCAAGAAGTCTAGATCTTCTTATTCCTCAGAGATAGAAGGTGATGAGTCTTCTTCACCAGACTTAAATACAATTCGAAATAAAGTGAAGATCAATCTTGAAGAGGATTCACCCAAGCAAGAAGTTCTACCAGCTGAATCTTTAACTGAGTTCCTCAGAGATACTAGTGTAATTACTGTAGATGCTGTGGATGTGGCTAATGAAAATGCAGCTGGGTTATCAGAATCTTCTAATAAGGTGCTTCCTGGGTTATCTTCTTGTGTTTTGACAAATGGTGACACTAATTCTGTTGACAAAGATATACTGCAGCAGGAAATATTACAGGAGCTATCAGTTGGGTCTTCCAGTAGAAATCCAGTCTCACTTGTACCTGGACTTGAATCTTCATGCTGTAAAGATGCAGATCAACCCAGTCCAGTCTCAGTCCTAGAACCTTCTTTTACTGATGATCTGTCATCTTGTTCTGAATGTTTTGAAAGTCTCAATGTTGACCTACAAGGGCTTCGAATGCAACTTCAGTTGCTGAAGTTGGAATCTGAAGAATATGTGGAAGGATCCATGCTAATTTCAAGTGACGAAGATTGTGGGGAAGAATCTACGGGAATTTTAGAAGACAATGGATTATGTAGAAATGAAGATAACTGGGAGTCTTCCTACATGATTGATGTCTTGTCTGAATCTGGTATTGATAGAGCTCAGCCTGAAGCATTTTTGGAAGTTTGGCATTCTCCAGAATGCCCTGTTAGTCTTTCAGTGTTTGATGAACTTGAAAAGAGGTACACTGATTGGACTACCTGCCCAAGGTCTGAAAGGAGATTGCTTTTTGACCGTATAAATTCTGGAATTGTCAATGTACATAAGCAATTCATGAGTGCACAGCCATGGGTAAGGCCCACAGGCACAAAATTATGTGCTAAATTGACAAAAAATGTGCTCCAAGATTGTTTGTACAGGATGCTGGGCAGCCAAGGAAAAGTAAAGGATACTGCTCTGGGGAAGGTGCTGGTGAGCCAATTGCAGTGGTTGAACTTAAGAGATGACATCGATTTTATAGGTAAGGAAGTTGAGAGCTTGTTATTAGATGATCTAGTGGCAGAGATAGCCGGCACATAG 2868 0.4142 MQRLKGSKQVRRHRKQKSFPSDSGSCGSGVADEDANSFQLGWRSSKQQLGTPMKKLLAAEMSRETESKRRAPSVIARLMGLDGLPLQLPKQHTGSSENHLKASTQVGKTRSSGTLYDGRSSRRSSKDQQEFKDVFEVSEIPKAQSSRYASQGPVDLKISDDEMSFIEQKFMDTKRLATYQDLQSSQDSHDTLEILDSNNDLLQKYFKRPDSLFKKHLDDLQAAPLQSNFCHVEAMKSDRERTGLNYNGSHQKHRDGFSNRFDRRHAMHISPKSSKLQFKGRDEPDAAPTRIVVLKPNLGKVQDATKFVSSPCSSHTFLSEFGEHAEFSDIRFRDNELNQKKNFPGTASARHSRQNSWESREIAKEITSQMKNSLNNSSMIFSSSRFRGYSWDGSSCSFSGNESPEESEVTTAILENSLDMSNTLRPSSHCGESSVSREAKKRLSERWKMSHKSQQGQSICRSNTLAEMLAIPDKEMKAANFDSTSRGEVFHNKVASNGKPAGLAEPVGISSRDGWKDGFIGSLPRSKSLPASSTVFGSPRAILRHEALRDDRFMMPKEAFKRERKKVVKCLDQRRCVNSRSSKSGRKKSRSSYSSEIEGDESSSPDLNTIRNKVKINLEEDSPKQEVLPAESLTEFLRDTSVITVDAVDVANENAAGLSESSNKVLPGLSSCVLTNGDTNSVDKDILQQEILQELSVGSSSRNPVSLVPGLESSCCKDADQPSPVSVLEPSFTDDLSSCSECFESLNVDLQGLRMQLQLLKLESEEYVEGSMLISSDEDCGEESTGILEDNGLCRNEDNWESSYMIDVLSESGIDRAQPEAFLEVWHSPECPVSLSVFDELEKRYTDWTTCPRSERRLLFDRINSGIVNVHKQFMSAQPWVRPTGTKLCAKLTKNVLQDCLYRMLGSQGKVKDTALGKVLVSQLQWLNLRDDIDFIGKEVESLLLDDLVAEIAGT. 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04534 955 MobiDBLite consensus disorder prediction 1 15 - -
Seca2g04534 955 MobiDBLite consensus disorder prediction 421 458 - -
Seca2g04534 955 Coils Coil 743 763 - -
Seca2g04534 955 MobiDBLite consensus disorder prediction 578 608 - -
Seca2g04534 955 Pfam Protein of unknown function (DUF3741) 167 211 IPR022212 -
Seca2g04534 955 MobiDBLite consensus disorder prediction 89 119 - -
Seca2g04534 955 Pfam Domain of unknown function (DUF4378) 802 951 IPR025486 -
Seca2g04534 955 MobiDBLite consensus disorder prediction 1 130 - -
Seca2g04534 955 MobiDBLite consensus disorder prediction 434 449 - -
Seca2g04534 955 Pfam DUF761-associated sequence motif 65 85 IPR032795 -
Seca2g04534 955 PANTHER AFADIN 11 953 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04534 Seca-Chr2 131129440 131134912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04534 50 953 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 36.567 8.92e-146 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04534 - - pvu:PHAVU_001G171300g 1218.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04534 2 131129440 131134912 Seca2g04534 2 131129440 131134912 ECH