Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04524 ATGGATATGCCTATTATAGGAACAATAGAAAGCGGCATAGTGGCTCTAGTTATGGAAAGGGGCAACCTTTCGGTTTGGTCTTTGAATTGGGACACAAACCTATTGGTCACTATCTATAGTGGCATAGTTTGTTCAGGATTGATTTATTACATCCAAGGAGTAGTGATGAAATATAGAGGCCCGGTCTTTGTAACAGCTTTTAAGCCCCTGAGCTTGGTCATTGTGGCTATCATGGGCTCCATCTTTTTGGATGAGCAAATGTATCTTGGAAGGGTGATCGGTGCCATTATTATTGTTATAGGTTTGTATTTAGTGGTGTGGGGTGAAAGCAAAGATTATCACTCACAAAGATGA 354 0.4068 MDMPIIGTIESGIVALVMERGNLSVWSLNWDTNLLVTIYSGIVCSGLIYYIQGVVMKYRGPVFVTAFKPLSLVIVAIMGSIFLDEQMYLGRVIGAIIIVIGLYLVVWGESKDYHSQR. 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04524 117 SUPERFAMILY Multidrug resistance efflux transporter EmrE 24 111 - -
Seca2g04524 117 PANTHER WAT1-RELATED PROTEIN 5 112 IPR030184 GO:0016020|GO:0022857
Seca2g04524 117 Pfam EamA-like transporter family 5 106 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04524 Seca-Chr2 130990112 130991226 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04524 5 114 Nodulin-like Gene Family AT2G37450 69.091 4.53e-52 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04524 - - vra:106757633 169.859