LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca2g04523	ATGAAGTACACAACAGCAACCTTTGTTGTTGCCATGACCAATATCCTTCCCGCCATCACCTTTATCACGGCTTGCATTCTTAAACTTGAGAAGATAAAAATAAAAAGTATACACAGTCAAGCAAAGATGGTAGGGACTTTAGTCGGTTTTGGAGGTGCTATGGTTATGGCACTAATAAAAGGCACATTGTTATTTGAGCTTTATGGGACACACACAAACAAAAACAACAACCAACATGATAATGAGCCAAATTTACAACATGTAATAAAGGATCAGTGA	279	0.3728	MKYTTATFVVAMTNILPAITFITACILKLEKIKIKSIHSQAKMVGTLVGFGGAMVMALIKGTLLFELYGTHTNKNNNQHDNEPNLQHVIKDQ.	93

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca2g04523	92	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	25	-	-
	Seca2g04523	92	PANTHER	WAT1-RELATED PROTEIN	1	74	IPR030184	GO:0016020\|GO:0022857
	Seca2g04523	92	MobiDBLite	consensus disorder prediction	73	92	-	-

Showing 1 to 3 of 3 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca2g04523	Seca-Chr2	130988951	130989930	Proximal

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca2g04523	1	64	Nodulin-like Gene Family	AT2G39510	60.938	5.90e-22	85.9

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca2g04523	-		-	lja:Lj1g3v4554740.1	108.612

Showing 1 to 1 of 1 entries