Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04520 ATGATTTTCAGGCCAGTTATTAACCAGAACTTATATTTTTTGGGAATGAAGTACACAACAGCAACATTTGTTGTTGCCATGACCAACATCCTTCCTGCCATTACCTTTCTTTTGGCTTGCATTCTTAAACTTGAGAGGATAAAAATAAAAAGTATACACAGTCAAGCAAAAGTGGTTGGGACTTTAGCCACTGTTGCAGGTGCCATGGTCATGACACTAATAAAAGGCCCAATATTTGAGCTTTTTGGGACACATGGAAGCAAAAACAACAACCAACTCAGTGGTGGGGTAGATCTTCTACATGCAATAAAGGGATCAGTGATGATCACAATTGGTTGCATTAGTTGGGCTTGTTTCATGATTCTCCAAGCTATTACGCTTGAAGCCTATCCAGCTGAGCTCTCTCTTACAGCATGGATATGCCTATTAGGAACAATTGAAGGTAGCATAGTAGCCCTAGTTATGGAAAGGGGCAACCCTTCAGTTTGGTCACTAAATTGGGATGCAAAACTGCTAGCAATTGTTTACACTGGCTTAATTTGCACAGGAATGACTTATTACATCCAAGGAGCAGTGATGAAATATAGAGGTCCAGTCTTTGTAACAGCTTTTAATCCCTTGTGCATGGTCATTGTGGCAATCATGAGCTCCTTCTTTCTGGATGAACAAATGTACCTTGGAAGGATTATCGGTGCCATTGTTATTATTTTAGGGCTATATCTAGTTGTGTGGGGTAAAAGCAAAGATTACAATTCACCAAGTCCAACTATGAAGGAGCATATATTGCCAGCTAAGCAAACTCCAGATGAGAGCAATACTCAAGAACATTTTAATCCTGAGGTCATCACTATCAGTAACTTTGGTGTGGGAGAAATATTGTAG 882 0.398 MIFRPVINQNLYFLGMKYTTATFVVAMTNILPAITFLLACILKLERIKIKSIHSQAKVVGTLATVAGAMVMTLIKGPIFELFGTHGSKNNNQLSGGVDLLHAIKGSVMITIGCISWACFMILQAITLEAYPAELSLTAWICLLGTIEGSIVALVMERGNPSVWSLNWDAKLLAIVYTGLICTGMTYYIQGAVMKYRGPVFVTAFNPLCMVIVAIMSSFFLDEQMYLGRIIGAIVIILGLYLVVWGKSKDYNSPSPTMKEHILPAKQTPDESNTQEHFNPEVITISNFGVGEIL. 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04520 293 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 248 - -
Seca2g04520 293 PANTHER WAT1-RELATED PROTEIN 3 250 IPR030184 GO:0016020|GO:0022857
Seca2g04520 293 Pfam EamA-like transporter family 104 243 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04520 Seca-Chr2 130895764 130898832 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04520 2 288 Nodulin-like Gene Family AT2G37460 60.627 3.23e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04520 - - pcin:129305629 444.121