Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04519 ATGGATAGCTATAACCAAAAAAGGTTTGATAGGATAAAGCCATTCATAGGTGTAGTGTTCTTACAATTTGGATATGCTGGTATGGATGTTCTGTCCAAGGCTGCAATGAACAAGGGAATGAGCAATTATGTACTAGTTGTTTATCGCCATGCTGTGGCCTTCATTGTCATGGCCCCTTTTGCACTACTCTTAGAAAAGAAAGTAAGGCCAAAGATGACATTTTCAATCTTCATGAAGATAGTGGCCCTCAGTGTGCTAGAGCCAGTTCTTGATCAGAATTTATATTTTTTGGGAATGAAGTACACAACAGCAACCTTTGCAGTTACCATGCTCAATGTCCTTCCTGCCATTACCTTTGTCATGGCTTGCATTCTTAAGCTTGAGAAGATAAAAATAAAAAGTATCCGCAGTCAAGCAAAGGTGGTTGGGACTTTAGCCACTGTTGCAGGAGCCATGGTCATGACATTGATAAAAGGCCCAGTACTTGACCTTTTTGGGACACATAGAAGCAATATCCATAACCAATACAATGGTGGGGCAAATGTTCAACATGCAATAAAAGGATCTGTGATGATCACAATTGGTTGCTTTAGTTGTGCTTGTTTTACAATTCTTCAAGTGAGTTTCTATTTATCATTATTAATAAAAAAAGCCATTACCCTTGAATCCTACCCTGCTGAGCTCTCTCTTACAGCATGGATATGCCTATTTGGAACAATTGAAGGTGGCATAGTGGCCTTGATTATGGAAAGGGGTAACCCTTCAGTTTGGTCTATAAATTGGGATACAAAACTATTGGCTGCCGTCTATAGTGGCATAATTTGCTCAGGAATGGCTTATTACATCCAAGGAGCAGTGATGAAATATAGAGGCCCAGTCTTTGTAACAACCTTCAATCCCTTATGCATGATCATTGTGGCTATCATGGGCTCCTTTTTTTTGGCTGAGCAAACCTACCTTGGAAGGGTGATTGGTGCCATTATCATTATTATAGGGCTATATCTAGTGGTGTGGGGTAAAGGCAAAGATTATGACACACCAAATCCAATTATTAAAGAGCAGATATTGCCAGAAAAGCAACCTACAGAGAGCAACACCAAAGAGGAGCATTCTAATCACAAGGTCATTGTTATCAATAACTTTGATGCGGGAAACATAACTCAAGATGAACAAGTACGAGGAAACACACAAAATTCAATCTAA 1203 0.3948 MDSYNQKRFDRIKPFIGVVFLQFGYAGMDVLSKAAMNKGMSNYVLVVYRHAVAFIVMAPFALLLEKKVRPKMTFSIFMKIVALSVLEPVLDQNLYFLGMKYTTATFAVTMLNVLPAITFVMACILKLEKIKIKSIRSQAKVVGTLATVAGAMVMTLIKGPVLDLFGTHRSNIHNQYNGGANVQHAIKGSVMITIGCFSCACFTILQVSFYLSLLIKKAITLESYPAELSLTAWICLFGTIEGGIVALIMERGNPSVWSINWDTKLLAAVYSGIICSGMAYYIQGAVMKYRGPVFVTTFNPLCMIIVAIMGSFFLAEQTYLGRVIGAIIIIIGLYLVVWGKGKDYDTPNPIIKEQILPEKQPTESNTKEEHSNHKVIVINNFDAGNITQDEQVRGNTQNSI. 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04519 400 Pfam EamA-like transporter family 218 337 IPR000620 GO:0016020
Seca2g04519 400 Pfam EamA-like transporter family 21 154 IPR000620 GO:0016020
Seca2g04519 400 PANTHER WAT1-RELATED PROTEIN 14 344 IPR030184 GO:0016020|GO:0022857
Seca2g04519 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Seca2g04519 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04519 Seca-Chr2 130874865 130877553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04519 6 393 Nodulin-like Gene Family AT2G37460 61.282 4.08e-169 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04519 - - gmx:100777050 596.66