Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca2g04508 | ATGACTTCATTCTTGAAGCCAGAGAATGCCCTCAAGAGGGTGGAAGAATTAATCAATGTTGGTCAGAAGCAGGATGCTTTGCAGACTCTTCATGACCTTATTACTTCGAAAAGATACAGAGCATGGCAGAAGACACTTGAAAGGATTATGTTCAAGTATGTAGAACTGTGTGTAGACATGCGTAAAGGACGGTTTGCAAAGGATGGTCTCATTCAGTATCGAATCATATGTCAGCAAGTGAATGTTAGTTCGCTTGAGGAGGTGATCAAGCATTTCATGCACCTATCCACTGAGAAAGCTGAACAAGCTCGTAGCCAGGCTCAGGCATTAGAAGAAGCCTTGGATGTTGATGACTTAGAGGCTGATAAAAGGCCAGAGGACTTGATGCTAAGCTATGTCAGTGGTGAGAAAGGAAAGGACAGGTCCGACAGGGAGCTTGTTACCCCATGGTTTAAATTCCTATGGGAAACTTACAGGACAGTCCTTGAAATATTACGGAACAACTCAAAATTGGAATCCTTATATGCTATGACAGCCCATCGAGCCTTCCAGTTCTGCAAGCAATATAAACGAACAACAGAATTTCGAAGACTTTGCGAGATCATAAGAAACCATTTAGCCAATCTTAATAAATATCGGGACCAACGAGACCGACCTGATCTTTCTGCTCCTGAGAGCTTGCAACTATATCTTGATACAAGATTTGAGCAGCTGAAAATTGCCACTGAACTTGAACTCTGGCAGGAAGCCTTCCGATCAGTTGAAGATATACATGGACTGATGTGCATGGTCAAGAAAGTCCCTAAGCCATCCTTGATGGTTGTTTACTATGTTAAGCTGACAGAAATATTTTGGATATCATCAAGTCATCTATATCATGCATATGCATGGTTCAGGCTCTTTTTATTACAAAAAAGCTTCAATAAAAATCTTAGTCAGAAGGATTTGCAATTAATAGCATCATCTGTTGTTCTGGCTGCACTTTCAGTGCCACCTCATGATCACACTCATGGTGCATCTCATTTGGAATTGGAGCATGAAAAGGAGAGAAATTTGAGGATGGCCAATCTTATTGGCTTTAATCTTGAAACAAAACCTGAGAGCAGAGAAGTGCTCTCGAGGTCATCACTTCTTGCTGAACTGGCATCGAAGGGTGTGATGTCTTGTGTAACTCAGGAAGTGAAGGACATATACTATCTTCTGGAACATGAATTTCTCCCCTCAGATCTTGCACTAAAAGTGCTGCCCTTGTTAACTAAAATTTCAAAATTAGGGGGCAAGCTTTCCACCGCTTCATCTGTTCCAGAGGTTCATTTGTCTCAGTATGTACCAGCACTGGAAAAGCTAGCTACCTTGAGGTTGCTACAGCAGGTGTCTAATGTGTACAAGACAATGAAGATTGAAACCTTATCTGGGATGATCCCCTTCTTCGATTTTTCTGTAGTGGAAAAGATTTCTGTGGATGCTGTTAAGCAGAAGTTTGTATCGATGAAAGTTGACCACATGAAAAATGTTGTCATTTTCTGTAAAATGAATCTTGAGTCTGATGGCTTAAGGGATCACTTGGCAAATTTTGCTGAACAATTGAATAAGGCAAGACAAATGATTTATCCTCCTGATACGAAACCATCTAAACTTGGAGCTTTGCTTCCAACTTTGACAGAGGTTGTCGCCAAAGAACACAAGAGGCTCCTTGCTCGAAAATCGATTATCGAGAAGAGGAAAGAAGAACAAGAACGACAGCTTCTTGAAATGGAACGTGAGGAGGAATCAAAGAGATTAAAACTACAAAAGATAACTGAAGAAGCAGAGCAAAGAAGGCTTGCAACTGAGTATGAGAGGATGAAGAATCAGAGAATCCTCAGGGAAATAGAGGAAAGAGAAAATGAAGAAGCTCAAGCTTTACTTCAGGAAGCTGAGAAGCGAATCACTAAGACGAAAGGTAAAAGGAGGCCAATCATAGAGGGGGACAAAATGACCAAGCAGGCATTGATGGAGTTGACATTGACTGAACAACTCCGGGAAAGACAGGAGATGGAAAAGAAACTGCAAAAATTAGCTAAAACCATGGATTATCTGGAAAGAGCAAAAAGAGAGGAGGCTGCTCCCCTGATTGAAGCTGCATATCAACAGCGCCTAGTGGAAGAGAGGATTCTTCATGAGCGTGAGCAACAACAAGAGGTTGAACTGAGCAAACAGAGGCACGAGGGAGACCTTAAGGAGAAGGAGAGGCTTGCTCGAATGATGAGCAATAAAGAGATATATCAAGCGAGAGTTGTCAGTCATCGCCAAGCAGAATTTAACAGATTGAAGAGAGAAAGGGAGGAGCGAATCTCTAGGATTTTACAGTCCAGGAGGCAGGAAAGAGAAAAAATGAGGAAGTTGAAGTTTTATCTTAAGTTAGAAGAAGAGAGACAACAAAAATTGCATGAGGAAGAAGAAGCTCGGAAGCGTGAAGAGGCTGAGAGGAAGAAGAAGGAAGAGGCTGAACGCTTAGCAAAATTGGCTGAGATAGCTGAAAAGCAGAGGCAAAGAGAGCGGGAACTTGAAGAAAAGGAGAAACAAAGGAGAGAAGCATTGTTGGGTAAATCTGCTGAACCAGCTTTTAAGCCTTCTGAGCCTCCTGCACGTCCATTGGATTCTGCACCAGCTGCAGCTGCCGCAGCCCCAGCTCCAGCTCCAGGTAAATACGTCCCTAAGTTCAGGAGAGAGAGAACTGAAAGCACAGCAGCTGTTCCTCCTCCAGAAACAGATCGTTGGAATAACAGCAGCACCAGGCCAGATGGTGGTGACAGGTGGCGTAGTGATGATCGCAGAACTGCATTTGGTTCTGGTTCTAGGTCATCTTCTACTTGGTCATCTTCCAGGAATCGTGATCGTTGA | 2883 | 0.428 | MTSFLKPENALKRVEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLESLYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELELWQEAFRSVEDIHGLMCMVKKVPKPSLMVVYYVKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDHTHGASHLELEHEKERNLRMANLIGFNLETKPESREVLSRSSLLAELASKGVMSCVTQEVKDIYYLLEHEFLPSDLALKVLPLLTKISKLGGKLSTASSVPEVHLSQYVPALEKLATLRLLQQVSNVYKTMKIETLSGMIPFFDFSVVEKISVDAVKQKFVSMKVDHMKNVVIFCKMNLESDGLRDHLANFAEQLNKARQMIYPPDTKPSKLGALLPTLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLKLQKITEEAEQRRLATEYERMKNQRILREIEERENEEAQALLQEAEKRITKTKGKRRPIIEGDKMTKQALMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERILHEREQQQEVELSKQRHEGDLKEKERLARMMSNKEIYQARVVSHRQAEFNRLKREREERISRILQSRRQEREKMRKLKFYLKLEEERQQKLHEEEEARKREEAERKKKEEAERLAKLAEIAEKQRQRERELEEKEKQRREALLGKSAEPAFKPSEPPARPLDSAPAAAAAAPAPAPGKYVPKFRRERTESTAAVPPPETDRWNNSSTRPDGGDRWRSDDRRTAFGSGSRSSSTWSSSRNRDR. | 961 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca2g04508 | 960 | Coils | Coil | 615 | 649 | - | - | |
Seca2g04508 | 960 | Hamap | Eukaryotic translation initiation factor 3 subunit A [EIF3A]. | 1 | 933 | IPR027512 | GO:0005852 | |
Seca2g04508 | 960 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 441 | 532 | IPR000717 | - | |
Seca2g04508 | 960 | MobiDBLite | consensus disorder prediction | 806 | 960 | - | - | |
Seca2g04508 | 960 | Coils | Coil | 669 | 699 | - | - | |
Seca2g04508 | 960 | Coils | Coil | 732 | 752 | - | - | |
Seca2g04508 | 960 | Gene3D | UVR domain | 217 | 267 | - | - | |
Seca2g04508 | 960 | Gene3D | - | 352 | 510 | - | - | |
Seca2g04508 | 960 | Gene3D | - | 268 | 342 | - | - | |
Seca2g04508 | 960 | ProSiteProfiles | PCI domain profile. | 316 | 513 | IPR000717 | - | |
Seca2g04508 | 960 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 268 | 342 | - | - | |
Seca2g04508 | 960 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 352 | 494 | - | - | |
Seca2g04508 | 960 | Coils | Coil | 798 | 859 | - | - | |
Seca2g04508 | 960 | Pfam | PCI domain | 373 | 508 | IPR000717 | - | |
Seca2g04508 | 960 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT | 1 | 951 | IPR027512 | GO:0005852 | |
Seca2g04508 | 960 | Coils | Coil | 561 | 602 | - | - | |
Seca2g04508 | 960 | Coils | Coil | 93 | 120 | - | - | |
Seca2g04508 | 960 | MobiDBLite | consensus disorder prediction | 806 | 863 | - | - | |
Seca2g04508 | 960 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 217 | 268 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca2g04508 | Seca-Chr2 | 130767656 | 130775404 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca2g04508 | 1 | 958 | Eukaryotic Initiation Factors Gene Family | AT4G11420 | 71.472 | 0.0 | 1316 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca2g04508 | K03254 | - | gmx:100803796 | 1506.12 |