Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04502 ATGCCCAACGCGACCACCATCAAAACATCCTCCGATGGAGCATGGCAAGGCGATAATCCTTTGAACCACGCTCTTCCACTCTTGATCATTCAAACCACCCTTGTCCTATTTTTCAGCCGCACCCTCGCCTTCTTCCTCAAACCCCTTCGTCAACCCAAAGTTGTTGCTGAGATTATTGGTGGAATTTTGCTAGGACCTTCAGGCATTGGGAGGAACAAAAGTTTCATGCAGATAGTGTTCCCTCCATGGAGCACTCCAATACTTGAATCCGTAGCCAGCATTGGTCTCTTATTCTACCTCTTCCTAGTGGGACTAGAGCTTGACCTTCGCACCATTGGCAGAAGCGGCAAGCGAGCCTTCAACATCGCCGTTGCCGGAATATCCCTTCCATTCCTCTTCGCCGTCGGCGTAACATTCCTCCTTCAAAAAGCCATCCACTCCGAAAATCACCACAAAGTCGGTTACATTCAGCGCTTCGTTTTCTTAGGCGTTTCTCTCTCTATAACCGCTTTCCCTGTGCTCGCCCGCATCTTAGCAGAACTCAAACTCCTAACAACCCGCGTTGGAGAAACCGCCATGGCTGCTGCCGCCTTCAACGACGTCGCCGCATGGGTTTTATTAGCCCTCGCGGTGGCTCTAGCCGGTGGCGCCGGTGGTGGTGGACATGGCAACAAGAGCAGCCTCCTCACGTCGGTATTGGTGCTGTTTTCAGGCATTGCGTTTGTTACATTCATGATGTTGGTTGTTAGACCGATGATGAACCGTGTCGCGCGGCGGTGTTCGAGGGAACATGATGTGTTGGATGAAATGTACATATGTTTGACGCTTGCTGGTGTGATGTTGTCGGGGTTTGTAACGGATTTGATAGGGATACATTCGATTTTTGGGGCTTTTGTTTTTGGATTAACGATTCCGAGAGGGGGTGAGTTTGCGAGCAGGGTTACGAGGAGGATTGAGGATTTTGTGTCAACGTTGTTGCTTCCTTTGTACTTTGCGTCGAGTGGGTTGAAGACTGATGTGGGGAAGTTGCAAGGTGTGGTGGAATGGGGGTTGCTTTTGGTGGTTATAGCGACGGCGTGTGTGGGGAAGATTTTGGGGACTTTTGTTGTGGCGGTTATGTGTACGATGCCTGTGAGGGAATCGTTGACGCTTGGAGTGTTGATGAATACCAAAGGGTTGGTGGAGCTTATTGTTCTCAATATTGGCAAAGAAAAGAAGGTTCTTAACGACGAGATGTTTGCCATCCTGGTGCTCATGGCTCTCTTCACCACCTTTATTACAACTCCAGCAGTTGTGGCAATATATAAACCCTCTCGTTCTGTTAATCCTCGCAATCATCATCGCCAATTGCCAAAAACGACACCACTAACAGACATGGAAGAGAAGCTTCGCATTCTTGCTTGCATCCATGGAACTGGAAACATCCCCTCACTAATCAACTTCATTGAATCAGTTCGAGCCACCAACAAGTCTAAGCTCAAACTCTACGTGATGCAACTCACTGAACTCACTGATAGCTCATCCTCTATCTTGATGGTTCAACGCAGCAGAAAGAGTGGGTTTCCCTTCATCAACAGATTCCAGAAAGGAACAATGCATGAGCAAATTGCAACAGCATTTCAGGCTTATGGTCAAGTGGGTCAAGTTACTGTGCATCATTTGACATCCATCTCATCATTATCAACAATCCATGAGGACATATGCCATGTTGCAGAAGAGAAAGGTGTGGCAATGATCATACTGCCCTTCCACAAAAGGTGGAGAGGGGAAGATGAAGAGGGAATAGAGAACATAGGGCAGGGATGGAGGGAAGTCAATCGGAGGGTGCTACAGAGTGCACCCTGCTCTGTTGCAGTGCTTGTCAATCGTGGGGTTGGCGTCAATGCTGTTGCTGCTGCAGGGAAAAGGGTCTGCATAATTTTCATTGGTGGACCAGATGATAGAAAGGTTTTAGAGTTGGGAAGTAGAATGGCAGAACATCCAGCAATTAGGTTGTCTGCTGTGAGATTCACTTCATACAGAGAAGCCAGGCACGACGGATGCAACTACAACTCATCAACATCAGCTGACAATTGGGAAAAAGAGAAGGAGTTGGATGAGGTGGCTGTAAACGAGTTCAAAACTAAATGGCTTGGGTCAGTAGAGTACATTGAAAAGGACGCAGCCAACATAGCAGAGGAGGTGCTAGCAATTGGGAAGGCTAAGAAGTACGAGCTAGTTATTGTGGGGAAGGGACATCAGCTTCTTGAGTCAAACATGATGACAAACATAAAAGATTCTTATCCTGAACATGCTGAGCTAGGACCTATTGGGGATCTGTTGACTTCTTCAGGTCAGGGCATTATGAGTTCAGTGCTCGTTATACAGGACCAACATTTGATAAATTCAAATGAAACTCTCAGAAGAGCAGCAATGGCCAAGAGTACTGTTATTAGGACTATCTCAGAAATTGAATCATCAGTGTAA 2466 0.4716 MPNATTIKTSSDGAWQGDNPLNHALPLLIIQTTLVLFFSRTLAFFLKPLRQPKVVAEIIGGILLGPSGIGRNKSFMQIVFPPWSTPILESVASIGLLFYLFLVGLELDLRTIGRSGKRAFNIAVAGISLPFLFAVGVTFLLQKAIHSENHHKVGYIQRFVFLGVSLSITAFPVLARILAELKLLTTRVGETAMAAAAFNDVAAWVLLALAVALAGGAGGGGHGNKSSLLTSVLVLFSGIAFVTFMMLVVRPMMNRVARRCSREHDVLDEMYICLTLAGVMLSGFVTDLIGIHSIFGAFVFGLTIPRGGEFASRVTRRIEDFVSTLLLPLYFASSGLKTDVGKLQGVVEWGLLLVVIATACVGKILGTFVVAVMCTMPVRESLTLGVLMNTKGLVELIVLNIGKEKKVLNDEMFAILVLMALFTTFITTPAVVAIYKPSRSVNPRNHHRQLPKTTPLTDMEEKLRILACIHGTGNIPSLINFIESVRATNKSKLKLYVMQLTELTDSSSSILMVQRSRKSGFPFINRFQKGTMHEQIATAFQAYGQVGQVTVHHLTSISSLSTIHEDICHVAEEKGVAMIILPFHKRWRGEDEEGIENIGQGWREVNRRVLQSAPCSVAVLVNRGVGVNAVAAAGKRVCIIFIGGPDDRKVLELGSRMAEHPAIRLSAVRFTSYREARHDGCNYNSSTSADNWEKEKELDEVAVNEFKTKWLGSVEYIEKDAANIAEEVLAIGKAKKYELVIVGKGHQLLESNMMTNIKDSYPEHAELGPIGDLLTSSGQGIMSSVLVIQDQHLINSNETLRRAAMAKSTVIRTISEIESSV. 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04502 821 PANTHER CATION/H + ANTIPORTER 8 791 - -
Seca2g04502 821 Gene3D - 27 441 IPR038770 -
Seca2g04502 821 FunFam Cation/H(+) antiporter 15 27 442 - -
Seca2g04502 821 Pfam Sodium/hydrogen exchanger family 34 431 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca2g04502 821 Gene3D - 495 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04502 Seca-Chr2 130708513 130714719 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04502 74 821 Antiporter Super Family AT3G53720 57.821 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04502 K26731 - gmx:100799165 1132.09