Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04501 ATGAATGAGGCATCGATTCCAATTGCCAAAGGTGTAGAGAAATGGGTCAAAAATATTCATGAAAATATTGTGCAACATGACCAAGAGAGTGTTGTTGACTATACACCATACTTGGAAATGGAGTTTGAATCTGAGGTAGCGGCCTATGAATTTTATAATGAGTACAGTAGAAGAATTGAGTTTGGTATTCGTCGAGAATATGGAAATAAAAGCAAAAAAGATGGAATTCTAACTTCAAGAAGATTCTCATGCTTCAAAAAGGGTAAACGGGGCGTTGACAAACGAGACCATTTGACAAAAGAGCCTAGAGCTGAAACTAGAATGGGATGTGAAGCACGTATGGTTATTTCACTTGATCGAAAGATCGGGAAATACAAGGTTATTGACTTTGTAGCTCAACATAATCATCCTCTTCAACCGCCAAAATATGTTCATATGATTTGCTCTCATCGACATATTTCTGAGTCACAAGAATCACAAATTGTATTGGCAAATGAATCTGGATTGAAACCCCAAAAGATTTTCATGAATATGTGTCCAAGCAAGTTGGTGGAATAG 558 0.3692 MNEASIPIAKGVEKWVKNIHENIVQHDQESVVDYTPYLEMEFESEVAAYEFYNEYSRRIEFGIRREYGNKSKKDGILTSRRFSCFKKGKRGVDKRDHLTKEPRAETRMGCEARMVISLDRKIGKYKVIDFVAQHNHPLQPPKYVHMICSHRHISESQESQIVLANESGLKPQKIFMNMCPSKLVE. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04501 185 Pfam FAR1 DNA-binding domain 50 140 IPR004330 -
Seca2g04501 185 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 177 - -
Seca2g04501 185 ProSiteProfiles WRKY domain profile. 65 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04501 Seca-Chr2 130688226 130688783 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g04501 FAR1 1.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04501 - - psat:127085847 250.751