Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04494 ATGGCCGGAAAAGGTGAGGGTCCTGCGATCGGAATCGATCTCGGAACAACATACTCTTGCGTCGGCGTCTGGCAACATGACCGTGTCGAAATTATTGCCAACGACCAAGGTAACAGAACGACGCCGTCTTACGTCGCCTTCACTGACACCGAGCGTCTCATTGGTGATGCTGCTAAGAACCAGGTGGCCATGAACCCTATCAACACCGTCTTCGGTGAGATCTGCTATTCCATGCAACTTATCTTAGCTATATTGTTCTATTTTCTCGATCTATTCACATAG 282 0.4894 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFGEICYSMQLILAILFYFLDLFT. 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04494 93 Gene3D - 2 80 - -
Seca2g04494 93 PANTHER HEAT SHOCK PROTEIN 70KDA 9 72 IPR013126 GO:0005524|GO:0140662
Seca2g04494 93 SUPERFAMILY Actin-like ATPase domain 8 72 IPR043129 -
Seca2g04494 93 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Seca2g04494 93 PRINTS 70kDa heat shock protein signature 8 21 - -
Seca2g04494 93 PRINTS 70kDa heat shock protein signature 58 66 - -
Seca2g04494 93 PRINTS 70kDa heat shock protein signature 36 48 - -
Seca2g04494 93 FunFam Heat shock 70 kDa protein 1A 2 86 - -
Seca2g04494 93 Pfam Hsp70 protein 9 71 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04494 Seca-Chr2 130586435 130586716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04494 1 71 Calmodulin-binding Proteins AT5G02500 95.775 1.01e-45 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04494 K03283 - aew:130767672 149.058