Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04478 ATGAGTCCTTCATTTGGTGATCAGATAGATGATAAGCCGATTGTTTCTGACTCAATAAGAGCATCGTCAAATAAAAAAATAAATGGAACACCCATCAAGATGCTCATAGACCAAGAAATGTCCAGAGAGATTGTTTCCAAGCACAATCCGCCAAATGTAGTTGCAAAATTAATGGGGCTTGAAGCCCTCCCTCAGGGAGAGCATAATTTAGCTGTGGAGAGAAGCCGTAGAGGAGATTATTCTCAACATATGTGTGGTCATTCAGGGGCACCATTCAATCATTGGCAGCTGGAAGATAGGTTTATGGACAAGGAAATGCTTCATGAAATTCATCCTAGCACAGAACAGATTGCTTACAAAGATATTTATGAAATATGGCTGCAATCACAGAGAACAAGCAATGCAACACCAGAGAGAGAAAAATGGACTGAAGATGTTAATGAGAAGAAAATGGCCCTCATTCGCCAGAAATTCATGGAAGCTAAACGTCTGTCTACAGATGAGAGACTGCGTCAGTCCAAGGAGTTTGATGATGCCTTGGAAATTTTAAGCTCCAATAACGATCTATTAATCAGGTTATTGGATTCCCAAAATCTTTATGAACTTCAGTCTACTCCACTAGCCGAGACAAAGCGTATTACTGTTCTTAAACCTTCAAAGATGATTGATAATGAAAAATCCAGCAGAAAGGGGAAGAAGAACGACAAGCATACTAAGAAAACAGCAAATGCTGGTGCTACATGGGAAAAAAATAGCCCTGGATACTCTCCAGCCAGTCAGAGAGTTGATGAATTTCCAGTTCAACCTACTCGGATAGTGGTATTGAAGCCTAGTTCCGTGAAGACACATGAGATTAAGGCTGTAGTTTCTCCAACAGCATCATCACCTCAAAATATGCAATGTGGAAATTTCTATCAGAGCCCTGAAGATGATGATGTACTGGAATCAAGAAAAGTGGCAAAAGAAATTACACAGCAAATGCATGAAAACATGAGGAGCTATCCAAGAGATGAAACTTTGTATTCTTCAGTATTTTCCAATGGCTATATTGGTGATGATAGTTCGTTCAACAAATCAGATCATGAGTACACTGCAGGGAATTTTAGTGATTTGGAAGTAATGTCACCATCTCCAAGGCATTCTTGGGATTACATCAATCGCTGTGGCAGTCCTTATTCTTCATCATCCTTCAGTCGTGCTTCATGTTCTCCTGAGTCGTCAGTATGCAGAGAGGCCAAGAAACGACTTTCTGAAAGATGGGCTATGATGGCATCTACTAAGGGTGCTCAAGAACAAAGGCATATGCGGAGAAGCTCTACCTTGGGTGAGATGCTTGCTCTTTCAGATATAAAGAAATCTCTAATATCTGAGATTGAAATCATTAATAAAGAACAAGAACCAAGTGAATCTGTTTCTTGCAGTCAAAATTTCAATGAAGAAATATGTGAGGATGGTTCTCCTAAAAACCTTCCCAGGTCAAAATCTCTTCCTGTATCTTCCACTGTCTATGAAAATGGGCTCAACATTGAAATTTGTAATAATGATGGTAGTAAAGCTCATGACTCCAAGGAGCTGACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTACTAGTTTCTTGTTCTCAAGGAATAAGAAATCAACCAAGGAAAAATCTTGTCTATCTCAATCTAAAGATGAGCCCCAATCTACTGTTGCTGAAACATCAGTATCTCCAATAAATTCACCTGAAGTCCTTAGGGATGATGTGTCTCAAAGCTTCAATGATGGTTCCTTTGGAGAGTGTTCTCTTCCAACTCTATTTGAATCATCGAGCAAAACTTTATCAGATTCTGTCTCTAATGGACAGGGTGTAATATCTCTGGAGCCTGGGTTGACTGTGCCAAAGCCCACGGTGCCAGGGATTTCAAGTGAAAACCAGGATCAGCCGAGTCCAATCTCAGTTTTAGAACCTCCATTTGAAGATGATAATGCAGCTCATGAGTCCTTGGACTGTATGAAGGGTGGTCAGCTGGGCTCACGGGTGAAACTGAAGTCTAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTCGAACCCTCTCGTGGGATGATTCCTGTGCAGAGGTAGCAAGTCCCTACCCATTAAAGCCTTCGTTGGTTTCCTTAGACACCAAAGTAGAGGATCAAGACTGGCTTGTCTTGGTCGAGAAACTACTATCAGCTGCTGGACTTGATGATCAAGTGCAGCCTGACTCGTTTTACTCTAGATGGCACTCCCTTGAAAGCCCATTGGATCCATCATTGAGGGACAAATATGCCAATTTCAATGACAAGGAGCCTCAGCCTCTCCATGAAGCCAAGCGAAGACAGAGGAGATCTAATCAGAAACTAGTATTCGATTGTGTCAATGTTGCACTAGTAGAAATTACTGGTTATGGATCAGAAAATTACTCAGTGGGCAGGTTATGGAGTGGGGGCCACAGCAGGCTCCAAGTCCAAGAGGGTGCACCTGCCCCATTGGTGGACCTCATTGTGGCCCAAATGAAGGAGTTAATATCTAGTGGGATAAGGTCTGTTTGGGGGGATTGTGGGGACAGCAACAGCCTGGTGGTGGAGAGTGTTGTCAGAAAAGAGGTTGTGGGGAAAGGGTGGGTTGAGCTTATGCGATTGGAAATGGATATTTTGGTGAAGGAAGTAGAGGGGAAGTTGCTTGAAGAACTTGTGGAGGATGCGGTGGTTGATTTGACAGGCAGGGCTTGA 2754 0.4198 MSPSFGDQIDDKPIVSDSIRASSNKKINGTPIKMLIDQEMSREIVSKHNPPNVVAKLMGLEALPQGEHNLAVERSRRGDYSQHMCGHSGAPFNHWQLEDRFMDKEMLHEIHPSTEQIAYKDIYEIWLQSQRTSNATPEREKWTEDVNEKKMALIRQKFMEAKRLSTDERLRQSKEFDDALEILSSNNDLLIRLLDSQNLYELQSTPLAETKRITVLKPSKMIDNEKSSRKGKKNDKHTKKTANAGATWEKNSPGYSPASQRVDEFPVQPTRIVVLKPSSVKTHEIKAVVSPTASSPQNMQCGNFYQSPEDDDVLESRKVAKEITQQMHENMRSYPRDETLYSSVFSNGYIGDDSSFNKSDHEYTAGNFSDLEVMSPSPRHSWDYINRCGSPYSSSSFSRASCSPESSVCREAKKRLSERWAMMASTKGAQEQRHMRRSSTLGEMLALSDIKKSLISEIEIINKEQEPSESVSCSQNFNEEICEDGSPKNLPRSKSLPVSSTVYENGLNIEICNNDGSKAHDSKELTKSKSMKSSFKGKVTSFLFSRNKKSTKEKSCLSQSKDEPQSTVAETSVSPINSPEVLRDDVSQSFNDGSFGECSLPTLFESSSKTLSDSVSNGQGVISLEPGLTVPKPTVPGISSENQDQPSPISVLEPPFEDDNAAHESLDCMKGGQLGSRVKLKSNLIDKSPPIESIARTLSWDDSCAEVASPYPLKPSLVSLDTKVEDQDWLVLVEKLLSAAGLDDQVQPDSFYSRWHSLESPLDPSLRDKYANFNDKEPQPLHEAKRRQRRSNQKLVFDCVNVALVEITGYGSENYSVGRLWSGGHSRLQVQEGAPAPLVDLIVAQMKELISSGIRSVWGDCGDSNSLVVESVVRKEVVGKGWVELMRLEMDILVKEVEGKLLEELVEDAVVDLTGRA. 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04478 917 MobiDBLite consensus disorder prediction 553 581 - -
Seca2g04478 917 MobiDBLite consensus disorder prediction 221 261 - -
Seca2g04478 917 Pfam Protein of unknown function (DUF3741) 155 198 IPR022212 -
Seca2g04478 917 MobiDBLite consensus disorder prediction 244 258 - -
Seca2g04478 917 MobiDBLite consensus disorder prediction 560 581 - -
Seca2g04478 917 Pfam Domain of unknown function (DUF4378) 732 908 IPR025486 -
Seca2g04478 917 Pfam DUF761-associated sequence motif 50 65 IPR032795 -
Seca2g04478 917 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 5 916 - -
Seca2g04478 917 MobiDBLite consensus disorder prediction 634 662 - -
Seca2g04478 917 MobiDBLite consensus disorder prediction 635 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04478 Seca-Chr2 130367725 130372474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04478 3 914 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 42.583 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04478 - - gmx:100816611 1494.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04478 2 130367725 130372474 Seca2g04478 2 130367725 130372474 ECH
Seca8g05526 8 146667908 146672704 Seca2g04478 2 130367725 130372474 PCT