Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca2g04442 | ATGGAATCCAAAGTTCAACTCTTTTTCCTTACCTTTTTCCTCCTCAATATTCTTACCATCCATGCAGGAACTCTTGGAACTTACATAGTTCAGCTACACCCTCATGGCACAACCAGCTCTTTATTCACCTCAAAGCTCCAATGGCATCTTTCATTCATACAACAAACCATTTCCTCTGATGAGGAACCTTCTTCACGCCTCCTTTACTCTTACCGTTCTGCCATGGATGGTTTTGCAGCTCAGCTAACTGAGTCTGAGCTTGAGTACTTGCAAAGGTTGCCTGATGTTATCTCAGTTAGGCCTGACCGGAAGCTCGAGATTCAGACCACCTATTCTTACAAGTTCTTGGGGCTGAACCCTGCAAGAGAAAATGGTTGGTATCAGTCTGGGTTTGGCCGTGGAACTATAATTGGGGTGCTTGATACTGGAGTGTGGCCTGAGAGTCCAAGCTTCAATGATCAAGGAATGCCTCCAGTTCCCAAGAAATGGAAGGGTATATGCCAAAAAGGGCAGGCCTTTAACTCTTCCAATTGTAACCGAAAACTTATTGGTGCAAGGTACTTTACCAAAGGCCATCTTGCAGTGTCACCTACAAACTCCTCTGGACATGGCACACACACTTCATCCACTGCTGGTGGAGTGCCAGTGCCAATGGCAGGTGTGTTTGGTTATGCACAAGGTGTGGCAAGAGGAATGGCTCCTGGTGCCCACATTGCTGTGTACAAAGTGTGCTGGTTCAATGGCTGCTATAACTCTGATATCATGGCTGCAATGGATGTGGCAATCAGAGATGGTGTGGACATTCTGTCTTTGTCTCTAGGTGGCTTCCCAGTTCCTCTATATGATGATAGTATTGCCATTGGAAGCTTTAGAGCAATGGAGCATGGAATTTCAGTTATATGTGCAGCAGGAAACAATGGCCCAACAGCAATGTCTGTTGCCAATGAAGCTCCTTGGATTGCCACTATTGGTGCAAGCACACTAGACAGGAAGTTCCCAGCTATAGTTCACATGGGTAATGGACAAGTCCTCTATGGAGAATCCATGTATCCAGTGAACCGACTAAGGAACAATAGCAAAGAAGTTGAGCTGGTTTATGTGACTGATGGGGACAGGGAGAGTCAATTTTGCCTCAGAGGGTCTCTTCCAAGGGACAAAGTTCAGGGCAAAATGGTGGTATGCGATCGAGGTGTCAATGGCAGAGCAGAAAAGGGTCAAGTGGTGAAGGAGGCAGGTGGTGCTGCTATGATCTTGGCAAACACAGAACTAAACTTGGAAGAGGATTCAGTTGACGTTCATGTCTTGCCTGCAACTTTGGTAGGATTTGATGAATCAGTCACCTTGAAAGCTTATATAAACTCTACAAGGAGGCCCCTTGCTCGAATTGAATTTGGAGGAACTGTAATAGGGAAGTCTAGAGCTCCAACAGTAGCAAGATTTTCAGCTAGAGGACCAAGTTTTACAAACCCTTCAATCCTCAAACCAGATGTTATAGCTCCAGGAGTCAACATCATTGCTGCATGGCCTCAGAACCTTGATTCTAGAAGAGTAAACTTCTCTGTCATGTCCGGTACCTCAATGTCATGTCCTCATGTGAGTGGAATTGCTGCTCTTATTCGTTCAGCTCACCCAAGATGGAGCCCTGCAGCTATCAAATCTGCAATTATGACAACAGCTGAGGTAACTGACCACTCAGGAAGACCAATATTTGATGAAGACAAACCAGCAGGAGTTTTTGCCATGGGAGCTGGAAATGTGAATCCACAAAGAGCATTAAACCCAGGCCTGATATATGACATTAGGCCAGATGACTATGTCAACCACCTTTGCAGCCTTGGATACACAACCTCAGAAATTTTCAGCATCACTCACAGAAATGTGAGCTGCCATGCAATCAAGCAGATGAATAGAGGCTTCAGCCTTAACTATCCCTCAATCTCAGTAACTTTCAAGGATGGAATGAGGAGAAAGATGTTTAGCAGGAGACTAACAAATGTGGGAAGTCCTAACTCCATCTACTCAGTGGAGGTCATGGCACCTGAAGGAGTAAAAGTGATAGTGAAACCCAAGAGGCTGGTATTTAAACAAATAAATCAAAGCCTGAGTTACAGGGTATGGTTTATATCAAGGAAAAGGGTCAAAAAAGGTGCTGATATGATGACCTTTGCAGACGGGCATTTGACATGGGTACACTCCCAAAATGGTTCTTACAGGGTTAGAAGCCCAATAGCAGTGACTTGGAAGTCCAAGTAG | 2253 | 0.4501 | MESKVQLFFLTFFLLNILTIHAGTLGTYIVQLHPHGTTSSLFTSKLQWHLSFIQQTISSDEEPSSRLLYSYRSAMDGFAAQLTESELEYLQRLPDVISVRPDRKLEIQTTYSYKFLGLNPARENGWYQSGFGRGTIIGVLDTGVWPESPSFNDQGMPPVPKKWKGICQKGQAFNSSNCNRKLIGARYFTKGHLAVSPTNSSGHGTHTSSTAGGVPVPMAGVFGYAQGVARGMAPGAHIAVYKVCWFNGCYNSDIMAAMDVAIRDGVDILSLSLGGFPVPLYDDSIAIGSFRAMEHGISVICAAGNNGPTAMSVANEAPWIATIGASTLDRKFPAIVHMGNGQVLYGESMYPVNRLRNNSKEVELVYVTDGDRESQFCLRGSLPRDKVQGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTELNLEEDSVDVHVLPATLVGFDESVTLKAYINSTRRPLARIEFGGTVIGKSRAPTVARFSARGPSFTNPSILKPDVIAPGVNIIAAWPQNLDSRRVNFSVMSGTSMSCPHVSGIAALIRSAHPRWSPAAIKSAIMTTAEVTDHSGRPIFDEDKPAGVFAMGAGNVNPQRALNPGLIYDIRPDDYVNHLCSLGYTTSEIFSITHRNVSCHAIKQMNRGFSLNYPSISVTFKDGMRRKMFSRRLTNVGSPNSIYSVEVMAPEGVKVIVKPKRLVFKQINQSLSYRVWFISRKRVKKGADMMTFADGHLTWVHSQNGSYRVRSPIAVTWKSK. | 751 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca2g04442 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 199 | 212 | IPR015500 | - | |
| Seca2g04442 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 132 | 151 | IPR015500 | - | |
| Seca2g04442 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 523 | 539 | IPR015500 | - | |
| Seca2g04442 | 750 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 524 | 534 | IPR023828 | - | |
| Seca2g04442 | 750 | Pfam | Subtilase family | 132 | 562 | IPR000209 | GO:0006508|GO:0008236 | |
| Seca2g04442 | 750 | FunFam | subtilisin-like protease SBT1.5 | 329 | 469 | - | - | |
| Seca2g04442 | 750 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 61 | 745 | IPR045051 | - | |
| Seca2g04442 | 750 | FunFam | Subtilisin-like protease SBT1.5 | 134 | 340 | - | - | |
| Seca2g04442 | 750 | SUPERFAMILY | Subtilisin-like | 108 | 596 | IPR036852 | GO:0004252|GO:0006508 | |
| Seca2g04442 | 750 | FunFam | Subtilisin-like protease SBT1.9 | 17 | 108 | - | - | |
| Seca2g04442 | 750 | Gene3D | - | 609 | 747 | - | - | |
| Seca2g04442 | 750 | Pfam | Fibronectin type-III domain | 641 | 745 | IPR041469 | - | |
| Seca2g04442 | 750 | Pfam | Peptidase inhibitor I9 | 27 | 107 | IPR010259 | - | |
| Seca2g04442 | 750 | SUPERFAMILY | PA domain | 356 | 426 | IPR046450 | - | |
| Seca2g04442 | 750 | CDD | PA_subtilisin_like | 336 | 462 | - | - | |
| Seca2g04442 | 750 | Gene3D | Peptidase S8/S53 domain | 134 | 605 | IPR036852 | GO:0004252|GO:0006508 | |
| Seca2g04442 | 750 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 19 | 107 | IPR037045 | - | |
| Seca2g04442 | 750 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 110 | 592 | - | - | |
| Seca2g04442 | 750 | Pfam | PA domain | 363 | 444 | IPR003137 | - | |
| Seca2g04442 | 750 | CDD | Peptidases_S8_3 | 105 | 559 | IPR034197 | - | |
| Seca2g04442 | 750 | Gene3D | - | 329 | 469 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca2g04442 | Seca-Chr2 | 129830939 | 129833239 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Seca2g04442 | 1 | 749 | Subtilisin-like Serine Gene Family | AT1G04110 | 65.806 | 0.0 | 1061 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca2g04442 | - | - | gmx:100790205 | 1310.43 |