Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04441 ATGAAAAACCAGTTTTTCATCTTCTTCTTCTGTTGTATTGGTTGTTTCTATTATGGTCATGCTGCTGCTGCAAATGATGAAGTATCAGCTTTGCTTTCTATAAAAGAAGGTCTCATTGATCCGTTGAACACACTGAAGGATTGGAGAAATGATGCAGCTCATTGTAACTGGACTGGAGTCACATGCAACTCAGCTGGAGCTGTAGAGAAGCTTGATCTCTCACACAAGAATCTCAGTGGCAGAGTATCCAATGATATACAAAGACTTAAAAGTCTCACTTCTTTCAACTTGTGTTGCAATGCATTTTCATCAACATTGCCAAAATCTATAGTCAATCTCACTGCACTGAATAGTCTTGATGTTAGCCAGAATTTCTTCATTGGTGACTTTCCCTTAGGCCTTGGAAGAGCATGGAGACTTATGACCTTGAATGCTTCTAGCAATGAGTTCTCAGGTTCACTTCCTGGGGACCTTGGAAATGCCACTTCCTTAGAGATGCTGGATCTCAGAGGTAGCTTCTTTGAAGGGTCAGTTCCTAAATCATTCAGTAACTTGCATAAGTTGAAGTTCCTTGGTCTATCTGGGAATAATCTCACTGGGGAAATTCCTGGAGAACTGGGACAGCTTTCATCACTGGAGAGTATGATCCTTGGGTATAATGAATTTGAAGGTGGGATTCCAGCTGAGTTTGGAAATCTCACTAGTCTTAAGTATCTTGATTTAGCAGTAGCCAATCTTGGTGGTGAGCTTCCAGCTGAATTGGGAAACCTCAAGTTATTGGATACAGTTTTCTTATACAACAACAATTTTGAAGGCAGAATTCCACCAGCAATTGGCAACATGACTTGTTTGCAGTTGCTGGATCTTTCTGATAACATGTTGTCAGGAAAAATTCCAGCTGAAATAAGTCAGCTGAAGAATTTAAAGCTTCTGAACTTCATGGGCAACCAGCTATCTGGTCCTGTGCCTTCTGGCCTTGGAGATTTGCCTCAATTGGAGGTGCTTGAGCTATGGAATAATTCCTTGTCAGGGCCATTGCCTAGTAACCTTGGCAAGAATTCACCATTGCAATGGTTGGATGTATCATCCAATTCATTCTCTGGAGTGATTCCAGATACTCTTTGCAGCCAGGGCAATCTAACCAAGCTTATACTTTTCAATAATGCCTTCTCAGGTCCAATTCCATCAAGCCTATCAATGTGTCCTTCTCTTGTTCGTGTTCGAATTCAGAACAATTTTCTTTCTGGGACAGTTCCTGTGGGTCTTGGCAAGCTTGGGAAGCTTCAGAGGTTAGAATTGGCTAACAATAGTCTGTCTGGTGGAATTCCAGATGACATTGCTTCTTCCACATCCCTTTCTTTTATTGATCTCTCAAGAAACAAACTCCATTCTTCTCTTCCTTCCACCATTCTTTCCATTCCAAACCTGCAAGCCTTCATGGTCTCTAACAACAACTTGGAAGGTGAAATCCCAGACCAATTTCAGGACTGTCCCTCACTTACTGTTCTTGATCTCTCATCAAATCATTTATCTGGAAGCATTCCAGCTAGCATTGCTTCATGTGAGAAATTGGTAAATTTGAACCTACAAAATAACCAGTTGACTGGTGAAATCCCAAAAGCATTAGCTAACATGCCTACATTAGCCATGCTTGACCTTTCCAACAATTCTCTGACTGGCCATATACCTGAGAGCTTTGGTGTTTCTCCAGCTCTGGAAGCATTCAATGTCTCATACAATAAGCTTGAAGGTCCTGTCCCAGCAAATGGTATGCTAAGAACTATAAACCCAAATAATCTTGTGGGCAATGCTGGCCTATGTGGTGGTGTCCTCCTTTCATGTGACCAAAACTCTGCATACTCATCAAGGCATGGAAGCTTACATGCAAAGCACATCATTACAGGATGGATCATTGGAATATCATCAATCCTAGCCATTGGGATTACAATTTTGGTAGTAAGATCTGTATACATAAGGTGGTACACTGATGGATTTTGCTTCCGAGAAAGATTTTATAAGGGTAGCAAAGGGTGGCCTTGGAGATTGATGGCATTTCAGAGGCTTGGTTTTACAAGTACAGACATTCTAGCTTGCATCAAGGAAACAAATGTGATTGGCATGGGAGCTACTGGGGTTGTTTATAAGGCTGATATACCACATTCAAATACAGTTGTGGCAGTGAAAAAGTTGTGGAGATCAGGAACTGATATTGAAGTAGGAAGCAGTGATGACCTTGTTGGAGAGGTCAACGTTTTAGGAAGGCTAAGGCATAGGAACATTGTTAGACTATTAGGATTTCTCCATAATGACACTGATGTGATGATAGTTTATGAATATATGCACAATGGCAACCTTGGAGATGCCTTGCATGGTAGACAAGCAACAAGACTGCTTGTAGACTGGGTTTCAAGGTATAACATAGCACTAGGAGTTGCACAAGGACTTGCATATCTTCACCATGATTGTCATCCACCCGTTATCCATCGAGACATCAAATCAAACAATATATTGCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGCTTAGCCAAAATGATGATCAGGAAGAATGAAACAGTTTCCATGGTTGCTGGATCCTATGGCTACATTGCCCCTGAATATGGATATGCCTTGAAGGTGGATGAAAAGATTGATGTTTACAGTTATGGAGTAGTATTGTTGGAGCTTCTCACAGGAAAGAGGCCATTAGATCCTGACTTTGGAGAGTCTATAGACATAGTAGAGTGGATTAGAAGGAAGATTAGAGACAACAAATCTCTAGAAGCAGCATTAGACCCCAGTGTAGGTAACAGCAGGCATGTTCTAGAAGAGATGCTTTTAGTTCTAAGAATAGCAGTTCTTTGCACTGCCAAGCTCCCCAAAGACAGACCAACCATGAGGGATGTCATAATGATGCTTGAAGAGGCAAAGCCTCGGAGAAAGAGCAGTGGCAACAATGAAACTGCATCTTCAGCTAACAATAAAGAGATGCCAGTTTTTAGCACATCACCAGTTAATGGCCTTCTGTAG 3036 0.414 MKNQFFIFFFCCIGCFYYGHAAAANDEVSALLSIKEGLIDPLNTLKDWRNDAAHCNWTGVTCNSAGAVEKLDLSHKNLSGRVSNDIQRLKSLTSFNLCCNAFSSTLPKSIVNLTALNSLDVSQNFFIGDFPLGLGRAWRLMTLNASSNEFSGSLPGDLGNATSLEMLDLRGSFFEGSVPKSFSNLHKLKFLGLSGNNLTGEIPGELGQLSSLESMILGYNEFEGGIPAEFGNLTSLKYLDLAVANLGGELPAELGNLKLLDTVFLYNNNFEGRIPPAIGNMTCLQLLDLSDNMLSGKIPAEISQLKNLKLLNFMGNQLSGPVPSGLGDLPQLEVLELWNNSLSGPLPSNLGKNSPLQWLDVSSNSFSGVIPDTLCSQGNLTKLILFNNAFSGPIPSSLSMCPSLVRVRIQNNFLSGTVPVGLGKLGKLQRLELANNSLSGGIPDDIASSTSLSFIDLSRNKLHSSLPSTILSIPNLQAFMVSNNNLEGEIPDQFQDCPSLTVLDLSSNHLSGSIPASIASCEKLVNLNLQNNQLTGEIPKALANMPTLAMLDLSNNSLTGHIPESFGVSPALEAFNVSYNKLEGPVPANGMLRTINPNNLVGNAGLCGGVLLSCDQNSAYSSRHGSLHAKHIITGWIIGISSILAIGITILVVRSVYIRWYTDGFCFRERFYKGSKGWPWRLMAFQRLGFTSTDILACIKETNVIGMGATGVVYKADIPHSNTVVAVKKLWRSGTDIEVGSSDDLVGEVNVLGRLRHRNIVRLLGFLHNDTDVMIVYEYMHNGNLGDALHGRQATRLLVDWVSRYNIALGVAQGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELLTGKRPLDPDFGESIDIVEWIRRKIRDNKSLEAALDPSVGNSRHVLEEMLLVLRIAVLCTAKLPKDRPTMRDVIMMLEEAKPRRKSSGNNETASSANNKEMPVFSTSPVNGLL. 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04441 1011 MobiDBLite consensus disorder prediction 985 1011 - -
Seca2g04441 1011 SUPERFAMILY RNI-like 274 584 - -
Seca2g04441 1011 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 358 618 - -
Seca2g04441 1011 PRINTS Leucine-rich repeat signature 545 558 - -
Seca2g04441 1011 PRINTS Leucine-rich repeat signature 500 513 - -
Seca2g04441 1011 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 24 172 - -
Seca2g04441 1011 FunFam MDIS1-interacting receptor like kinase 1 699 783 - -
Seca2g04441 1011 SMART LRR_typ_2 185 209 IPR003591 -
Seca2g04441 1011 SMART LRR_typ_2 473 496 IPR003591 -
Seca2g04441 1011 SMART LRR_typ_2 89 113 IPR003591 -
Seca2g04441 1011 SMART LRR_typ_2 329 353 IPR003591 -
Seca2g04441 1011 SMART LRR_typ_2 233 257 IPR003591 -
Seca2g04441 1011 SMART LRR_typ_2 425 449 IPR003591 -
Seca2g04441 1011 SMART LRR_typ_2 281 305 IPR003591 -
Seca2g04441 1011 SMART LRR_typ_2 545 569 IPR003591 -
Seca2g04441 1011 SMART LRR_typ_2 497 521 IPR003591 -
Seca2g04441 1011 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 173 273 - -
Seca2g04441 1011 Pfam Protein kinase domain 701 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g04441 1011 Gene3D Transferase(Phosphotransferase) domain 1 784 1001 - -
Seca2g04441 1011 Pfam Leucine rich repeat 474 534 IPR001611 GO:0005515
Seca2g04441 1011 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Seca2g04441 1011 ProSiteProfiles Protein kinase domain profile. 699 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g04441 1011 SUPERFAMILY Protein kinase-like (PK-like) 695 976 IPR011009 -
Seca2g04441 1011 SUPERFAMILY RNI-like 70 376 - -
Seca2g04441 1011 FunFam MDIS1-interacting receptor like kinase 1 784 994 - -
Seca2g04441 1011 SMART serkin_6 699 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g04441 1011 MobiDBLite consensus disorder prediction 976 1011 - -
Seca2g04441 1011 FunFam Leucine-rich repeat receptor protein kinase EMS1 274 357 - -
Seca2g04441 1011 PANTHER UNNAMED PRODUCT 163 906 - -
Seca2g04441 1011 Gene3D Ribonuclease Inhibitor 17 71 IPR032675 -
Seca2g04441 1011 Gene3D Ribonuclease Inhibitor 326 622 IPR032675 -
Seca2g04441 1011 Gene3D Ribonuclease Inhibitor 72 325 IPR032675 -
Seca2g04441 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672|GO:0006468
Seca2g04441 1011 Gene3D Phosphorylase Kinase; domain 1 699 783 - -
Seca2g04441 1011 ProSitePatterns Protein kinases ATP-binding region signature. 705 729 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04441 Seca-Chr2 129821678 129825150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04441 5 1011 Receptor kinase-like Gene Family AT1G08590 59.748 0.0 1176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca2g04441 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04441 - - gmx:100811284 1774.99