Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04375 ATGGCAAAGGAGCAAATTCAGGTGTTAAATGCACTTGATGTGGCAAAAACACAATGGTATCACTTCACTGCAATCATCATAGCTGGAATGGGTTTCTTCACCGATGCATATGATCTATTCTGCATATCCCTTGTTACAAAGTTGCTTGGCCGCATATACTACCATGTTGATGGTGCAGAGAAGCCTGGTACATTACCTCCCAATGTATCAGCTGCTGTAAATGGGGTAGCTTTCTGTGGAACACTTTCAGGGCAGCTTTTCTTTGGCTGGCTTGGTGACAAGATGGGTAGGAAAAAAGTTTATGGTATGACTCTGATGCTGATGGTAATATGTTCCATTGGTTCTGGCCTTTCTTTTGGACATACTCCAAAATCTGTCATGGCAACTCTTTGCTTCTTCCGGTTCTGGCTTGGGTTTGGTATTGGTGGAGACTACCCACTTTCTGCTACCATTATGTCAGAGTATTCTAATAAGAAGACTCGTGGTGCCTTCATTGCTGCAGTCTTTGCCATGCAGGGTTTTGGAATTTTGGCAGGTGGTATATTTGCAATTATAATCTCATCTGCATTCAAGGCCAAGTTTGATTCTCCACCATACCAGGTTGATCCAGTTGGATCAACTGTTCCACAAGCAGACTATATTTGGAGGATAATTGTGATGGTTGGAGCACTCCCAGCTGCATTGACTTACTATTGGAGGAACACACAGCAAGCTGCTGCAGATATGTCTAAGGTTTTGCAGGTTGAGATTCAAGCTGAACCAAAGAAAGATGAGCAGCAAGCTAAATCATATGGCTTGTTCTCAAAGGAGTTCCTTACTCGTCATGGATTACATCTTCTTGGTACAGCAAGCACATGGTTCTTGCTTGATATTGCATTTTACAGCCAAAATCTCTTCCAGAAGGATATCTTCAGTGCAATTGGTTGGATCCCTCCTGCAAAAACCATGAATGCCCTTGAGGAAGTTTATAGAATTGCAAGAGCTCAAACACTTATTGCTCTTTGCAGTACAGTTCCAGGCTACTGGTTTACAGTGGCTTTCATTGACAAGATAGGAAGATTTGCTATTCAATTGATGGGATTCTTCTTCATGACTGTCTTCATGTTTGCTCTTGCCATTCCTTATGACCACTGGACTCATAAGGATAACAGAATAGGATTTGTGGTGATGTATTCCTTGACCTTCTTCTTTGCAAACTTTGGACCTAATGCTACCACATTTGTTGTGCCAGCTGAGATTTTCCCTGCTAGATTCCGAGCTACTTGCCATGGAATATCATCAGCATCCGGCAAGCTTGGGGCTATAGTTGGTGCGTTTGGGTTCTTATATTTAGCACAGAACAAGGACAAGAGCAAAGCAGATGCAGGGTACCCTGCAGGTATTGGTGTGAAGAATTCACTCCTTGTATTGGGTGTGGTTAACATTTTAGGCTTCTTTTTCACTTTCTTGGTACCTGAGGCAAAGGGGAAATCTTTGGAGGAGATGTCAGGTGAGAATGAAGAGGAAGTTGGAACCAAGGAAGAGTCAGAACAAACACATTCTTACAGCAATAGCAACAGAACTGTTCCATATGTTTAG 1578 0.4252 MAKEQIQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGTLPPNVSAAVNGVAFCGTLSGQLFFGWLGDKMGRKKVYGMTLMLMVICSIGSGLSFGHTPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIISSAFKAKFDSPPYQVDPVGSTVPQADYIWRIIVMVGALPAALTYYWRNTQQAAADMSKVLQVEIQAEPKKDEQQAKSYGLFSKEFLTRHGLHLLGTASTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNALEEVYRIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKDNRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRATCHGISSASGKLGAIVGAFGFLYLAQNKDKSKADAGYPAGIGVKNSLLVLGVVNILGFFFTFLVPEAKGKSLEEMSGENEEEVGTKEESEQTHSYSNSNRTVPYV. 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04375 525 SUPERFAMILY MFS general substrate transporter 12 496 IPR036259 -
Seca2g04375 525 MobiDBLite consensus disorder prediction 510 525 - -
Seca2g04375 525 CDD MFS_PhT 25 488 - -
Seca2g04375 525 Gene3D MFS general substrate transporter like domains 20 513 IPR036259 -
Seca2g04375 525 FunFam Inorganic phosphate transporter 1-6 20 511 - -
Seca2g04375 525 NCBIfam phosphate:H+ symporter 11 498 IPR004738 GO:0005315|GO:0006817|GO:0016020
Seca2g04375 525 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 487 - -
Seca2g04375 525 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 489 IPR020846 GO:0022857
Seca2g04375 525 MobiDBLite consensus disorder prediction 493 525 - -
Seca2g04375 525 Pfam Sugar (and other) transporter 26 496 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04375 Seca-Chr2 128756657 128758279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04375 1 502 Inorganic Solute Cotransporters AT3G54700 82.398 0.0 896
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04375 K08176 - gmx:100803626 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04375 2 128756657 128758279 Seca2g04375 2 128756657 128758279 ECH
Seca2g04375 2 128756657 128758279 Seca8g05633 8 147954399 147955973 PCT