Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04340 ATGATCCAGATGCTTCCATATCTCTTACTCTTACCACTCTTGTTCATCCTTCCCGTGCTCTTCTTCTTCTTCTTCTTCTTCTTCGTGAAACCTTCTTCTTCTTCTTCTTCTAACATTACCCTCCCAAAAGCGTATCCACTGATTGGTTCCTACTTAGCCCTCAAAGCCAACTCCAAACGCCGGATTCAATGGTTATCTGATATTGTCCAAATTTCACCCGCTGCCACCTTCACCTTCAACGGCACCATGGGTAGAAAACAAGTCATCACCGGCAACCCCGCCATCGTGCAACATATTCTCAAGACCCGATTCTCCAATTACCAAAAAGGCACCCTCTTCACCGGCACCCTCTCGGAATTCCTTGGCACAGGAATATTCAACACCAACGGCGACAACTGGAAGTTTCAAAGACAAGTTGCCAGCCACGAATTCAACACAAAGTCTCTCCGTAAATTCGTCGAACGCGTGGTGGACGCTGAGCTCTCTGACCGTCTCATCCCCATCCTCACATCCGCCTCTGCAACACAAGATCAAGTCCTCGATTTCCAAGACATCCTCCAACGTTTCGCGTTTGACAACATCTGCAAAATCGCGTTTGGGTTCGATCCAGAATACCTCACGCCGTCCGTTGAGAGGAGCAAGTTCGCGCAAGCTTTCGAAGCCGCAACGGAGATAAGCAGCAAACGGTTCCGCGAGCCGTTTCCCTTAATCTGGAAAATCAAGAAGCAACTGAACATAGGTTCGGAAAAGAAACTGCGAATGGCGGTGAGGGAAGTGCGTGAATTCGCGAGGAAGATAGTGAGAGAAAAAAAGCAAGAACTGAAGGAGAATGCGTCCCTCGAATCGGTGGATATGTTATCGCGTTTTCTGAGTTCGGGGCATTCGGATGAAGATTTTGTGATGGATATAGTGATAAGCTTTATATTGGCGGGGAAGGATACGACATCGACGGCGCTGACGTGGTTTTTCTGGTTGTTGTGGAAGAATCCGAGGGTGGAGGAGGAGATTGTGAAGGAGATAAGGGAGAAATCAGAAGCTCCTGTGTATGATGAAGTGAAGGAGATGGTTTTTACTCACGCGGCGTTGTGTGAGAGCATGAGGCTTTACCCGCCTGTGCCGATGGATAGTAAGGAAGCGATGGACGACGACGTTTTGCCGGATGGGACGAAAGTGAAGAAAGGGATGATAGTTACTTATCACGTGTACGCGATGGGGAGGATGGAGAGCCTTTGGGGTAGTGATTGGGCCGAGTTTAGGCCCGAAAGGTGGTTAGAAAAGGATGTGTCAAACGGCAAGTGGCAGTTTGTGGCGAGGGATTCATACTCGTATTCGGTGTTTCAAGCGGGTCCCAGGATTTGTTTGGGGAAGGAAATGGCTTTTTTGCAGATGAAGAGATTGGTGGCTGGCGTTCTGAGCCACTTCACTGTGGTGCCGTTGCCTCATTTAGCTGAGCATCCAAACTTCATTTCCTTCTTGACTTCCCAAATGGAAGGTGGTTTCCCTGTCACCATCCACCCAAGGCTTCCTTCTCCTTCAAATTAA 1542 0.487 MIQMLPYLLLLPLLFILPVLFFFFFFFFVKPSSSSSSNITLPKAYPLIGSYLALKANSKRRIQWLSDIVQISPAATFTFNGTMGRKQVITGNPAIVQHILKTRFSNYQKGTLFTGTLSEFLGTGIFNTNGDNWKFQRQVASHEFNTKSLRKFVERVVDAELSDRLIPILTSASATQDQVLDFQDILQRFAFDNICKIAFGFDPEYLTPSVERSKFAQAFEAATEISSKRFREPFPLIWKIKKQLNIGSEKKLRMAVREVREFARKIVREKKQELKENASLESVDMLSRFLSSGHSDEDFVMDIVISFILAGKDTTSTALTWFFWLLWKNPRVEEEIVKEIREKSEAPVYDEVKEMVFTHAALCESMRLYPPVPMDSKEAMDDDVLPDGTKVKKGMIVTYHVYAMGRMESLWGSDWAEFRPERWLEKDVSNGKWQFVARDSYSYSVFQAGPRICLGKEMAFLQMKRLVAGVLSHFTVVPLPHLAEHPNFISFLTSQMEGGFPVTIHPRLPSPSN. 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04340 513 CDD CYP86A 77 500 - -
Seca2g04340 513 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04340 513 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04340 513 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04340 513 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04340 513 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04340 513 SUPERFAMILY Cytochrome P450 42 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04340 513 PANTHER CYTOCHROME P450 29 502 - -
Seca2g04340 513 Pfam Cytochrome P450 42 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04340 513 Gene3D Cytochrome P450 23 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04340 513 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04340 513 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04340 513 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04340 513 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04340 Seca-Chr2 128220108 128221649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04340 13 507 Cytochrome P450 AT5G63450 46.614 3.43e-155 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04340 K20769 K13407 ag:AAD10204 756.133