Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04336 ATGGGAGAATTTGAGAAAGATTATAATGACAAACCCAGCTTTACACAAATCTTGGTAGTCTCTTCTATTGGGTTGATATTTGCTGTAGCCATGCATTATCGCCTGAAACAGATTAGAGATAGAAAGATCATCCCACGTGTAAGATTATCACGAGCAGGCCACATCCCAAAACTTGAAAGATTTTCCCATTACGTAGCCAGGCAAATGGGGTTCAAAGATAGGAGGAATTGTCCTCATCTATGTAGATTGGCTTCTGAGTACATAAGGAAATGTGAGGGATGTGAAGATGATATATATGCCTTCTTTGAGAACGAACTTGATGCGGATTCGCTTTATGTGAAGCTGGTTGAGGAGTTCGAGAGATGCATTCTTAGTTACTTTGGATTCCATTGGAAATATGGTGATATGTTGATAAGTCAGGTGTTGAGCTCAGAAGCTGAGGCAAAAAAGAAGCTCAAACACATAGTAATGGCAGCAACTAGGTGTAAACAGTGTTCTTTGCACAGGGACCAAAGGTTTGAGAGAGTAGCCAAGAATCTGAAGGTGGCCAGTGTTTTTAATACATTAGTAGAAGAGATGAAAGCAATGGGACTTGCAGCATCTGATGACTCTCAATGTACAGAGGTGATGGCTCCAGTAGCTCACAGCGATAGGAGCCCAGTGCTCTTGCTCATGGGGGGAGGTATGGGAGCTGGCAAGAGCACCGTACTCAAGGATATCCTCAAAGAGCCTTTCTGGGCAGGAGCAGCAGGGAATGCTGTAATCATCGAGGCAGATGCCTTCAAAGAATCAGATGTCATCTATAAGGCCCTTTGCTCAAGAGGTCATCATGACATGATTCGAACAGCTGAACTGGTACATCAATCATCCACAGATGCAGCCTCATCCCTCCTGGTAACAGCACTAAATGAGGGACGGGATGTAATTATGGATGGCACGCTCTCCTGGTTACCATTTGTTGTGCAGACAATAACAATGGCTAGAAATGTCCACCGCCGCCGTTATCGCATGGGAGTTGGCTACAGGGTGAATGAGGATGGAACTGTAACAGAAAACTATTGGGAACGAATTGAAGATGAAGAACCTGAACAAGTTGGAGGCAAAAAGAGAAAACCATATAGGATAGAACTGGTTGGAGTAGTGTGTGATGCTTACCTTGCAGTCGTCAGAGGCATAAGGAGAGCTATCATGTGTAGAAGAGCAGTGAGAGTAAATTCACAATTGAAATCCCACAAGAGATTTGCTGATGCATTTATGACTTACTGTCAACTAGTAGACAATGCCCGGCTATACTGCACAAATGCGTTGGAAGGCCCAGCCAAGTTGATAGGATGGAAAGATAGAGACAAGACACTACTCGTTGATCCAGATGAAATCGACTGTTTGAAGAGGGTTGCAAAGTTAAATGAAGACGCCAACTCCATATATGATCTTTACAAGCACCCCAATCCAGCTTGTGAAGCTGGATCAGTATGGAAAGACATTGTATTATCTCCTTCAAGGTTGAACATCCAACAGGAGCTCAAGTATTCAATTCAAAGAATTGAGAACTTGAAATGTGAGAAATTCACAGAGCACAGATAA 1584 0.4318 MGEFEKDYNDKPSFTQILVVSSIGLIFAVAMHYRLKQIRDRKIIPRVRLSRAGHIPKLERFSHYVARQMGFKDRRNCPHLCRLASEYIRKCEGCEDDIYAFFENELDADSLYVKLVEEFERCILSYFGFHWKYGDMLISQVLSSEAEAKKKLKHIVMAATRCKQCSLHRDQRFERVAKNLKVASVFNTLVEEMKAMGLAASDDSQCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGAAGNAVIIEADAFKESDVIYKALCSRGHHDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWLPFVVQTITMARNVHRRRYRMGVGYRVNEDGTVTENYWERIEDEEPEQVGGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRVNSQLKSHKRFADAFMTYCQLVDNARLYCTNALEGPAKLIGWKDRDKTLLVDPDEIDCLKRVAKLNEDANSIYDLYKHPNPACEAGSVWKDIVLSPSRLNIQQELKYSIQRIENLKCEKFTEHR. 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04336 527 PANTHER UNCHARACTERIZED 6 522 IPR044802 -
Seca2g04336 527 Gene3D - 203 437 IPR027417 -
Seca2g04336 527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 338 IPR027417 -
Seca2g04336 527 Pfam Zeta toxin 214 327 IPR010488 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04336 Seca-Chr2 128172015 128176661 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04336 - - gmx:121172610 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04336 2 128172015 128176661 Seca2g04336 2 128172015 128176661 ECH
Seca8g05699 8 148769531 148780254 Seca2g04336 2 128172015 128176661 PCT