Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04327 ATGGCTCTTGCTGGGTCTTCAGTGGAGCTTCAAGGTTCTTCTATAAAGAAGAAAACTGCTGTTTCAAGAAGCTGGATTTTGCTAGACCATGATGGCAGAGGCACTGTATTAGATGTGGATAAGTATGCTATTATGCGCCTGGTAGAAATTCACGCAAGAGATCTTCGAATTCTGGACCCTCTCCTTTCATATCCTTCAACCATTCTGGGCAGAGAGAAAGTCATTGTTCTCAATTTAGAGCACATCAAAGCTATTATCACTGCGGAAGAGGTGTTGCTTAGAGACCCAATGGATGATGATGTTGTGCCTATTGTTGAAGAACTTAGAAGACGGTTGCCCCAAGTAAATGCTGCTGGCCAAGGCCAAGGAGAAGAAGAGCCTAGTGCTCAAGATGGTGAAGGTGGAGAAGAAAATGATTTTCCATTTGAGTTCCGGGCCTTAGAAGTTGTGTTAGAGGCAATTTGTAGTTTCCTTGATGCAAGAACAAAAGAGTTAGAGACTGCTGCTTATCCTGCTTTGGATGAACTAACCTCTAAGATCAGCAGTCGTAATTTGGATAGAGTGAGAAAATTGAAAAGTGCAATGACAAGGTTGAATAATCGAGTTCAAAAGATAAGAGATGAACTAGAAAACCTACTTGATGATGCTGATGACATAGCTGATCTTTACTTATCAAGAAAGTTGGTTGTTTCATCCTCTCCCGAAAGTAGCTCTAATGCACCCAATTGGAATCATAGCTCTCCAAATCCGGGTTCAAAAATACACAGATCAAGCAGAACAAGTGCAACAACAGTTCATGGGGAGAATGATGTTGAGGAGCTTGAAATGTTACTTGAGGCCTATTTCATGCAAATTGATGGCACATTAAACAAATTGACCACAGTATGA 888 0.411 MALAGSSVELQGSSIKKKTAVSRSWILLDHDGRGTVLDVDKYAIMRLVEIHARDLRILDPLLSYPSTILGREKVIVLNLEHIKAIITAEEVLLRDPMDDDVVPIVEELRRRLPQVNAAGQGQGEEEPSAQDGEGGEENDFPFEFRALEVVLEAICSFLDARTKELETAAYPALDELTSKISSRNLDRVRKLKSAMTRLNNRVQKIRDELENLLDDADDIADLYLSRKLVVSSSPESSSNAPNWNHSSPNPGSKIHRSSRTSATTVHGENDVEELEMLLEAYFMQIDGTLNKLTTV. 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04327 295 MobiDBLite consensus disorder prediction 115 137 - -
Seca2g04327 295 MobiDBLite consensus disorder prediction 232 267 - -
Seca2g04327 295 Gene3D Magnesium transport protein CorA, transmembrane region 103 295 - -
Seca2g04327 295 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 12 294 IPR039204 -
Seca2g04327 295 Gene3D - 9 96 - -
Seca2g04327 295 FunFam Magnesium transporter MRS2-1 13 96 - -
Seca2g04327 295 CDD Mrs2_Mfm1p-like 25 295 IPR039204 -
Seca2g04327 295 Coils Coil 188 222 - -
Seca2g04327 295 MobiDBLite consensus disorder prediction 232 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04327 Seca-Chr2 127972129 127977370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04327 14 295 MRS2 Gene Family AT5G64560 73.868 4.56e-124 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04327 K16075 - gmx:100799368 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04327 2 127972129 127977370 Seca2g04327 2 127972129 127977370 ECH