Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca2g04313 | ATGGAGACGCACGGCGGAGGAGGACCCCTTCGTTCCCGTAGCTCCCAATCTCCTTCTCCTTCACACTCTGCCTCCGCTTCCGCCACATCTTCCATCCACAAACGCAAGATGGCGTGTGACGACCACGCGCCTCCCTTCCCCCCTTCTTCCTTCTCCGCTGACACCCGCGACGGTGCCCTTACCTCCAATGACGACCTCGAGAGTATCTCCGCCCGCGGTGCCGACTCCGACTCCGACGAAGACTCCGAGGACGCCGTCGTCGACGACGACGAAGACGACTACGACTACGACAACGATTCCTCCATGCGCACCTTCACCACCGCCAGGCTCAACAACCCTCCCTCCGCTCCTCGCAACACCAAGCTCAAGACTGATAATAACTCTACCGTCAAGATCGAGAATTCCGACGCCGCCAAAGACGCCGGACCCACCGCCACCGGTGCCGCTGCCACCGCGGGCTCCGTCCCCGGCATTGTGGTTAAGGAGGACGCAACTAAGATTTTTACTGATAATTTACAAACAAGCGGAGCTTACAGCGCCAGGGAAGAGAGTCTGAAGAAAGAGGAGGAAGCAGGAAAGCTCAGATTTGAATGCCTTTCGAATGATGGTGTTGATGAGCACATGGTTTGGTTGATAGGACTGAAGAATATATTTGCTAGACAACTTCCCAATATGCCCAAGGAGTACATTGTCCGACTTGTTATGGATAGGAGCCATAAGTCTGTAATGGTTATAAGGCGCAATCATGTTGTTGGAGGCATTACATATCGTCCATATGTGAGCCAGAAGTTTGGTGAAATAGCCTTTTGTGCAATTACGGCTGATGAGCAAGTTAAAGGTTATGGTACCAGATTGATGAATCACTTAAAACAGTATGCACGGGATATAGATGGGCTGACACATTTTCTCACATATGCTGACAACAATGCTGTTGGCTATTTTATCAAACAGGGATTTACAAAAGAGATTCACTTGGACAAGGAGCGATGGCAAGGTTATATAAAGGATTATGATGGGGGAATTCTCATGGAATGCAAAATTGATCCAAAGCTCCCTTACACTGATTTGTCAACCATGATCCGTCGTCAAAGGCAGGCAATTGATGAAAAGATCAGAGAGCTGTCAAACTGTCATATTGTTTATCCTGGAATTGATTTTCAGAAGAAAGAAGCTGGCATTCCTAAAAAAATTGTTGATGACATCCCTGGTTTGAGAGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCACGATTCAGAACTTTGAGTGGTTCTACTGACAATGCTACAAATCAAAAACATTTGACTGTGTTTATGCGTTCACTTCTGAAGTCAATGCACGATCATGCTGATGCATGGCCATTCAAGGAACCAGTTGATGCAAGGGATGTTCCTGATTATTATGACATCATCAAAGATCCTATGGATTTGAAGACAATGACTAAGCGGGTGGAGTCAGAACAATATTATGTCACATTTGAGATGTTTGTTGCGGATGTCAGAAGAATGTTTGCGAATGCACGCACCTATAATTCTCCAGAAACAATTTATTACAAATGTGCTACAAGGCTTGAAGCCCACTTTCAAAGCAAAGTGACAGCAGGCCTGCAGTCAGGTTCCAAAATTCAGTAG | 1632 | 0.4712 | METHGGGGPLRSRSSQSPSPSHSASASATSSIHKRKMACDDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDEDSEDAVVDDDEDDYDYDNDSSMRTFTTARLNNPPSAPRNTKLKTDNNSTVKIENSDAAKDAGPTATGAAATAGSVPGIVVKEDATKIFTDNLQTSGAYSAREESLKKEEEAGKLRFECLSNDGVDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQYARDIDGLTHFLTYADNNAVGYFIKQGFTKEIHLDKERWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYPGIDFQKKEAGIPKKIVDDIPGLREAGWTPDQWGHSRFRTLSGSTDNATNQKHLTVFMRSLLKSMHDHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMTKRVESEQYYVTFEMFVADVRRMFANARTYNSPETIYYKCATRLEAHFQSKVTAGLQSGSKIQ. | 544 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca2g04313 | 543 | PANTHER | GH11602P | 77 | 540 | IPR037800 | GO:0004402 | |
Seca2g04313 | 543 | Pfam | Acetyltransferase (GNAT) family | 241 | 319 | IPR000182 | GO:0016747 | |
Seca2g04313 | 543 | Gene3D | - | 420 | 539 | IPR036427 | GO:0005515 | |
Seca2g04313 | 543 | CDD | NAT_SF | 241 | 295 | - | - | |
Seca2g04313 | 543 | PRINTS | Bromodomain signature | 450 | 463 | IPR001487 | GO:0005515 | |
Seca2g04313 | 543 | PRINTS | Bromodomain signature | 464 | 480 | IPR001487 | GO:0005515 | |
Seca2g04313 | 543 | PRINTS | Bromodomain signature | 499 | 518 | IPR001487 | GO:0005515 | |
Seca2g04313 | 543 | ProSiteProfiles | Bromodomain profile. | 447 | 518 | IPR001487 | GO:0005515 | |
Seca2g04313 | 543 | CDD | Bromo_gcn5_like | 435 | 534 | - | - | |
Seca2g04313 | 543 | SMART | bromo_6 | 428 | 537 | IPR001487 | GO:0005515 | |
Seca2g04313 | 543 | FunFam | Histone acetyltransferase KAT2A | 191 | 355 | - | - | |
Seca2g04313 | 543 | MobiDBLite | consensus disorder prediction | 9 | 32 | - | - | |
Seca2g04313 | 543 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 194 | 348 | IPR000182 | GO:0016747 | |
Seca2g04313 | 543 | ProSitePatterns | Bromodomain signature. | 452 | 510 | IPR018359 | - | |
Seca2g04313 | 543 | MobiDBLite | consensus disorder prediction | 100 | 134 | - | - | |
Seca2g04313 | 543 | Pfam | Bromodomain | 440 | 522 | IPR001487 | GO:0005515 | |
Seca2g04313 | 543 | MobiDBLite | consensus disorder prediction | 77 | 97 | - | - | |
Seca2g04313 | 543 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 203 | 353 | IPR016181 | - | |
Seca2g04313 | 543 | MobiDBLite | consensus disorder prediction | 54 | 69 | - | - | |
Seca2g04313 | 543 | MobiDBLite | consensus disorder prediction | 1 | 151 | - | - | |
Seca2g04313 | 543 | Gene3D | - | 190 | 354 | - | - | |
Seca2g04313 | 543 | SUPERFAMILY | Bromodomain | 418 | 532 | IPR036427 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca2g04313 | Seca-Chr2 | 127761496 | 127779874 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | GNAT | Seca2g04313 | Bromodomain | 2.2e-21 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca2g04313 | K06062 | - | gmx:100813942 | 902.123 |