Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04306 ATGACAATGGGAGTAGCAGGGGAGCCGAACAAGCTCGAAAGGCAAATTCAGAAGCAGATGGGCTGCATCTCTGGTTTCCTTCACATCTTCGATCGCCACCAGATTTTCGCCGGAAAAACCAGAAGACTCCCTCCCTCTGCGCCTCCTCCGGAAATCTACTCCTCGCCGGAGCCGGACACAAACACTGCCTCTCCGGCGGAATCAGCACCGGAAACAGAAACTGAAACCGAAATAACACCTCAACCATCAAAGCCGCCTCCTCCACCCCTTCCAGCTTTCGAATTCAAGGAAGGCACGAGATCTCCATGGAAATTCTCCAGAGAAGCTCCCAGACTCTCCTTGGATAGCAGAGCCGTTGTGGATGCCAAAGGAACCTTCGAGAAGCAGCGGCGATCCACCAGCGTCGTCGCCAGGCTCATGGGCTTGGAAGATTCAGACCCGAACCCGAACCCGGAGCTCAGAAGATCCGCTTCCGAATCCAGAGCTCCCAGAGAAGATCTGCCTCAACATCAGTATCGTTTCTTCGACACAACGAATTTCCAGTTAAAGCAGTTTCATCACCATGTTGATAAAAGAACCTCAGATCCAAACACGAAAACAGAGCCCACCAGAGGAGTAACAAGACAAAAGAAGAATTTCTACGATTCTGCTGACTTTTTCCCAGGGCCGAAGCTGCAGAATATTTCTGGCTACGGAGAGATTGAAAAGAGGTTGAAGATGCGAGGGATTGACGAACCTTCCAAGGATCTCGACACTCTCAAGCAAATCCTCGAGGCCTTGCAGCTCAAAGGTCTCCTTCATTCCAAGAAATCCATGCCTCGAATTAACCACAGGAACTTCGTCTTCGATGATACGAACGATTCTCCCATTGTCGTAATGAAACCCGCACGATCTCCCGGTTCGTTGAATCGAACCAGATGGACCGGGAACGATTCTCCACCGGCCTCCATTTTCCGGTCGAGACCGGAAATTGAACCGCAAAGCAGGGGAAAAACCCCGAGCTCGCCCACGCGCAGCCCGAACCGGACAAGGAAGGTGACGAAGACGGAACCGCAGAGAAAAATGAATGATGGTGCTGATCGGAGAAGAACTACTACTACTACTCCGGTTCATTCAAACAAGGTGAACCCGAGAAACGGACCGGACCGGCAAGTAACGTGCCGGTCGCCGAGGATGAGAAAAACCAACACTTACCAAAAGGAAGAAAAGGCTATGCCTATTGCAGAGGATGAATCCTCCACCGTTTCCGATAGCAGCTTCAGCACGTCTTCACACACTGATACAGAGAGGTTTAATAAGGTGGAGGATCAGTATAGGGAAGGGAGGAATCTACTGCAGAGGTGTGATAAGTTGCTGAATAGCATAGCGGAGATAACAGCAGGGACAGAGCTACAACCAAGTCCAGTATCTGTGCTTGACTCGTCGTTTTACAAGGATGAGTCGTCGTGTTCACCGTCCCCGGTAATGAAACGGTGCATTGATTACAGAGATCAAGCAGCAGAGTCAGAAGATGATGCATGGAGTTGCGAGGATTGCGATTTCTTATACGTTTCGGAGATACTGCGTGCTTCTAATTACTTCCCTGAAGACAGTGACGTTTTCCACTTTCTGGAGAAGCAGCAATATCTCAAGGGTCATGACACCTCCAAAGCCTCCACGCTACAAAGACGGTTGATCTTCGACACTATTCACGAGATCCTCAACCGTAACCGCCGTTTGCCGCCGTGGAGGGCGGTTTCCTGGACGGAGAACGCGCCGCTGTTGCATCGGATCTGGTCGGATTTTCAGCGGATCCGCGAGAGGGAAGAGTCGTCGGAGGATCTGTTTGAAGTGATATGCGGATTGTTGAGGAAGGACATGGAAGAGGGCGCCACAATGAATGAATGGGGAGAATGCCCCGTGGAAATGGGGGATATGGTGTTGGATATCGAACGGTTCATATTCAAAGATCTTATTGGCGAAACCATTCGAGATCTCGCCTCGTTTAAGGGACAGCGTAACAAAGTCTCAACGCTTCGCAGGAAGTTGGTGTTTTGA 2037 0.5056 MTMGVAGEPNKLERQIQKQMGCISGFLHIFDRHQIFAGKTRRLPPSAPPPEIYSSPEPDTNTASPAESAPETETETEITPQPSKPPPPPLPAFEFKEGTRSPWKFSREAPRLSLDSRAVVDAKGTFEKQRRSTSVVARLMGLEDSDPNPNPELRRSASESRAPREDLPQHQYRFFDTTNFQLKQFHHHVDKRTSDPNTKTEPTRGVTRQKKNFYDSADFFPGPKLQNISGYGEIEKRLKMRGIDEPSKDLDTLKQILEALQLKGLLHSKKSMPRINHRNFVFDDTNDSPIVVMKPARSPGSLNRTRWTGNDSPPASIFRSRPEIEPQSRGKTPSSPTRSPNRTRKVTKTEPQRKMNDGADRRRTTTTTPVHSNKVNPRNGPDRQVTCRSPRMRKTNTYQKEEKAMPIAEDESSTVSDSSFSTSSHTDTERFNKVEDQYREGRNLLQRCDKLLNSIAEITAGTELQPSPVSVLDSSFYKDESSCSPSPVMKRCIDYRDQAAESEDDAWSCEDCDFLYVSEILRASNYFPEDSDVFHFLEKQQYLKGHDTSKASTLQRRLIFDTIHEILNRNRRLPPWRAVSWTENAPLLHRIWSDFQRIREREESSEDLFEVICGLLRKDMEEGATMNEWGECPVEMGDMVLDIERFIFKDLIGETIRDLASFKGQRNKVSTLRRKLVF. 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04306 678 MobiDBLite consensus disorder prediction 56 79 - -
Seca2g04306 678 MobiDBLite consensus disorder prediction 411 427 - -
Seca2g04306 678 MobiDBLite consensus disorder prediction 139 168 - -
Seca2g04306 678 MobiDBLite consensus disorder prediction 292 433 - -
Seca2g04306 678 Pfam Domain of unknown function (DUF4378) 513 654 IPR025486 -
Seca2g04306 678 MobiDBLite consensus disorder prediction 343 361 - -
Seca2g04306 678 MobiDBLite consensus disorder prediction 301 315 - -
Seca2g04306 678 MobiDBLite consensus disorder prediction 327 342 - -
Seca2g04306 678 MobiDBLite consensus disorder prediction 187 206 - -
Seca2g04306 678 MobiDBLite consensus disorder prediction 362 383 - -
Seca2g04306 678 PANTHER LONGIFOLIA PROTEIN 73 678 IPR033334 GO:0051513
Seca2g04306 678 MobiDBLite consensus disorder prediction 394 408 - -
Seca2g04306 678 MobiDBLite consensus disorder prediction 39 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04306 Seca-Chr2 127667812 127671234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04306 369 678 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 43.438 6.80e-71 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04306 - - lja:Lj1g3v4449210.1 831.632