Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04294 ATGGATGTTGGAGATGGGCAGTATAAGAGGATAACAAATTTGACCGATGATGATATAAGGGGTTTGGAGTTTGTAACTCAACATGCTACTTTCAAGTTTTACAAGGAATATGCTAAAGCTCATGGTTTTGTAGTAAGGAAAGATGATATAAAGAAGGATTTTAGGGGTAACACTATGATGCGACAATTTGTATGCAATAAACCAGGACTAAGAAACAAAAAATATTTCATGAGGCTTCGGGTACGTTTCAATCGTAAGAAATCAAAATGGATAATGGTGTCTTTTGAGGAGGCACATAATCACGAGCTAACCTCTTCAGTATATGTGCATTTATATCCTGTTTATCGTAAAATGAGTGATGCAGATAAAACTCAGGTTGATAGTTTATGTGCCCATGGTGTTAGAACTTGTCACATTATTGGCTACATGTTCACCCAAAAAGGCGGATATGGTGGTTTAGGGTTTTGTAGAATATATGTATACAACTATATTGACAACAAGAGTCGTGAACGGGTAAAAGATGGTGATGCAATTGCTGCTTTAAGCTATTTAGGAGGTAAGGCACAACATGATCCAACATTATTTGCACAGTTCCAAATCACCACAAAAGGTAAGTTAAGACATATATTTTGGGCAAATAGAGCTAGCATATATGATTATCAATGTTTTGGTGATGTGGTTGCATTTGATAACACATAG 699 0.3591 MDVGDGQYKRITNLTDDDIRGLEFVTQHATFKFYKEYAKAHGFVVRKDDIKKDFRGNTMMRQFVCNKPGLRNKKYFMRLRVRFNRKKSKWIMVSFEEAHNHELTSSVYVHLYPVYRKMSDADKTQVDSLCAHGVRTCHIIGYMFTQKGGYGGLGFCRIYVYNYIDNKSRERVKDGDAIAALSYLGGKAQHDPTLFAQFQITTKGKLRHIFWANRASIYDYQCFGDVVAFDNT. 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04294 232 PANTHER OS01G0519700 PROTEIN 20 228 - -
Seca2g04294 232 Pfam FAR1 DNA-binding domain 32 74 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04294 Seca-Chr2 127517107 127517857 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g04294 FAR1 4.1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04294 - - ccaj:109792835 278.1