Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04267 ATGCCAACCACGCTGGGAATAGGAACTGCAAGAAGAAGAAGAAGAAATAATCTGAGACGCCTCAACCTATGTTTCTCAAATTTCATTCAACCGTTCGCTCCTGAATCTTCTCCTACCACTCCTACTTCTACATCTCGTCATATTGATGATCACAACCGTCCATCTTCAACCGCCACAGAAAATGCCACGTCATCAATCATGATCAAGAACTTCAACACACTCTACGACCAACCCTTAACCCTACAGTACTCTCATCTTTCCGAACCCGAACCCGAACCCGCGGATTTCGCCACCGCCTTTGCCTCCCAACGCTTCTTCTTCTCCTCCCCTGGCCGATCCAACTCCATCGTCGAATCCACCAACACTGACACCGACTTCACCCCGCCCTCATCCACCTCCTCATCCTCGTCGTTGCTGGCCACCGTGCCGACGGAGGCGGTTAATCCCTCCGCCGGCGATAATAACAACAAGAAGAATAACAAGCCTTTTCTTAACGGCACTGTGGCGGTGCCGACTTACTCGCCGGATCCTTACATGGACTTCCGGCGATCGATGCAGGAGATGGTGGAGGCGCGTCCGGAGTTGTTGATGGATGTGAAGTCCAATTGGGAAGCATTGCACGAGCTTCTTCTCTGCTATCTTGCGCTTAACCCGAAGAGCACTCACAGCTTCATTCTTCGCGCTTTCTCTGATGTTCTCGTTAGCCTCATGTCCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATCCTCCGCCGCCGCCGGAGAATCTCAATGGCAGCGGTGGCGGTGGATGTTAG 801 0.5156 MPTTLGIGTARRRRRNNLRRLNLCFSNFIQPFAPESSPTTPTSTSRHIDDHNRPSSTATENATSSIMIKNFNTLYDQPLTLQYSHLSEPEPEPADFATAFASQRFFFSSPGRSNSIVESTNTDTDFTPPSSTSSSSSLLATVPTEAVNPSAGDNNNKKNNKPFLNGTVAVPTYSPDPYMDFRRSMQEMVEARPELLMDVKSNWEALHELLLCYLALNPKSTHSFILRAFSDVLVSLMSFSSSSSSSSSSNPPPPPENLNGSGGGGC. 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04267 266 MobiDBLite consensus disorder prediction 112 167 - -
Seca2g04267 266 Pfam Transcriptional repressor, ovate 174 236 IPR006458 -
Seca2g04267 266 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 55 237 IPR038933 GO:0045892
Seca2g04267 266 MobiDBLite consensus disorder prediction 34 62 - -
Seca2g04267 266 ProSiteProfiles OVATE domain profile. 170 235 IPR006458 -
Seca2g04267 266 NCBIfam uncharacterized plant-specific domain TIGR01568 168 237 IPR006458 -
Seca2g04267 266 MobiDBLite consensus disorder prediction 241 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04267 Seca-Chr2 127151604 127152404 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca2g04267 Ovate 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04267 - - aprc:113871147 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04267 2 127151604 127152404 Seca2g04267 2 127151604 127152404 ECH
Seca8g05771 8 150019430 150020092 Seca2g04267 2 127151604 127152404 PCT