Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04252 ATGACGACGATACGCAGGTTTTGCTGCAACGATCTTCTTCGTTTTGCCTCCGTCAATCTTGACCATCTCACCGAAACTTTTAACATGTCCTTCTACATGACCTATCTTGCACGATGGCCCGACTATTTCCACGTTGCCGAAGGCCCTGGAAACCGAATCATGGGTTACATTATGGGTAAAGTAGAGGGGCAAGGAGAATCTTGGCATGGTCATGTAACTGCGGTAACTGTTGCTCCAGAGTATCGCAGACAGCAGTTAGCCAAGAAGCTGATGAATCTGCTGGAAGACATTAGTGACAATATTGACAAAGCTTACTTTGTTGATCTCTTCGTGAGGGCATCAAATGCACCGGCCATCAAGATGTATGAAAAGCTTGGCTATGTGATTTATCGACGAGTGCTACGCTATTATTCTGGGGAAGAAGATGGATTGGATATGAGGAAGGCATTATCTCGTGATGTTGAAAAGAAGTCCATCATCCCTCTTAAAAGGCCAGTCACTCCTGATGAATTAGAGTATGACTAA 525 0.4457 MTTIRRFCCNDLLRFASVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDNIDKAYFVDLFVRASNAPAIKMYEKLGYVIYRRVLRYYSGEEDGLDMRKALSRDVEKKSIIPLKRPVTPDELEYD. 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04252 174 Gene3D - 2 162 - -
Seca2g04252 174 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016747
Seca2g04252 174 CDD NAT_SF 45 97 - -
Seca2g04252 174 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016747
Seca2g04252 174 FunFam N-alpha-acetyltransferase 20 2 161 - -
Seca2g04252 174 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
Seca2g04252 174 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04252 Seca-Chr2 126995823 127002597 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca2g04252 Acetyltransf_1 8.2e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04252 K17972 - gmx:100306394 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04252 2 126995823 127002597 Seca2g04252 2 126995823 127002597 ECH