Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04175 ATGGCTGGGAGTAATGAAGTCAACCTTAATGAATCTAGGAGTGCTGTTCCACTCAATACATGGGTGCTTATCTCGAATTTCAAGCTGGCTTACAATCTTCTTAGACGTGCGGATGGAACATTCAACAGAGAGTTGGCAGAGTTTCTTGATCGGAAGGTTCCTGCCAATACAATTCCTGTTGATGGGGTCTTCTCTTTTGATCACGTTGATCGAAACAGTGGACTCTTCAATAGGGTGTACCTTCCAGATTCTGAAAATGAGACACAATGGGGTATCAAAAACCTTGAGAAGCCTTTGAGCACAACAGAGATTGTTCCTGTGATAATATTCTTCCATGGAGGAAGCTTCTCTCATTCCTCTGCAAACAGTGCTATCTATGACACCTTATGCCGTCGCCTTGTGAGCATTTGTAAGGCTGCTGTGGTGTCTGTGAATTACCGGCGATCACCGGAGCATAGGTACCCTTGTGCTTATGATGATGGTTGGTCTGCACTAAAGTGGGTAAAGTCAAGAACTTGGCTTCAGAGTGGAAAGGAATCTAAGGTTTATGTGTACATGGCTGGGGACAGTTCTGGTGGGAATATTGTTCATCATGTGGCAGTGAAAGCTGCTGAAGAAGAAATTGAAGTGTTAGGGAACATTCTTCTTCATCCTTTGTTTGGTGGGGAGAAGAGAACAGAGTCAGAGATGAGATTGGATGGGAAGTACTTTGTGAGATTGCAAGACCGTGATTGGTATTGGAGAGCTTTTCTACCTGAAGGAGAGGATAGAGACCATCCTGCTTGTAACCCATTTGGACCTAAAGGGAAAAGCCTTGCAGGACTCAAGTTCCCCAAAAGTCTTGTATGTGTAGCTGGTTTGGATCTTCTCCAAGATTGGCAATTGGCTTATGTGGAAGGTCTTGAGAAATCTGGCCAACAAGTCAAACTTCTTTACCTTAAGGAGGCCACAATTGGTTTCTACTTCTTGCCAAATAATGATCATTTCTATTGCCTCATGGAGGAGATCAAGAACTTCGTCAATTCTAACTGTTAA 1035 0.4348 MAGSNEVNLNESRSAVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVDRNSGLFNRVYLPDSENETQWGIKNLEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTLCRRLVSICKAAVVSVNYRRSPEHRYPCAYDDGWSALKWVKSRTWLQSGKESKVYVYMAGDSSGGNIVHHVAVKAAEEEIEVLGNILLHPLFGGEKRTESEMRLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPKGKSLAGLKFPKSLVCVAGLDLLQDWQLAYVEGLEKSGQQVKLLYLKEATIGFYFLPNNDHFYCLMEEIKNFVNSNC. 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04175 344 FunFam Gibberellin receptor GID1 1 342 - -
Seca2g04175 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Seca2g04175 344 PANTHER ARYLACETAMIDE DEACETYLASE 43 315 - -
Seca2g04175 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Seca2g04175 344 SUPERFAMILY alpha/beta-Hydrolases 60 341 IPR029058 -
Seca2g04175 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Seca2g04175 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04175 Seca-Chr2 125909154 125911596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04175 1 342 Carbohydrate Esterase AT3G63010 76.093 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04175 K14493 - gmx:100788435 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04175 2 125909154 125911596 Seca2g04175 2 125909154 125911596 ECH
Seca8g05025 8 139634921 139644239 Seca2g04175 2 125909154 125911596 ECH
Seca8g05025 8 139634921 139644239 Seca2g04175 2 125909154 125911596 PCT