Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04162 ATGGACAGGACAGACACTCAAAACTTCACGAACGTTGATTCTTTCTCTCAGCTCCCCTTTATCCGCCCTGCGACTAAAGAAAAAGGCATTCGACTCTTCGGCATAGAATTCGGCGACGCGCCTGTTGCCGCCGGTGAGTCCAAGTCAACGGAGAAAACCACCACCTGCAATGCCTTTAAGCTTGATGGTGATAACAATAAGGACAATAACAACACAGAGAATAGCCGAAGATTTGAATGCCATTACTGTTGTAGAAACTTCCCCACTTCTCAGGCGTTGGTGGCCACCAAAACGCTCACAAACGAGAACGCCAGCAAGCGAAACGACCGTACCTCCACCCAGCTATGA 348 0.4914 MDRTDTQNFTNVDSFSQLPFIRPATKEKGIRLFGIEFGDAPVAAGESKSTEKTTTCNAFKLDGDNNKDNNNTENSRRFECHYCCRNFPTSQALVATKTLTNENASKRNDRTSTQL. 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04162 115 PANTHER ZINC FINGER PROTEIN GIS 1 93 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04162 Seca-Chr2 125551120 125552549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04162 4 107 C2H2 Transcription Factor Family AT3G58070 48.673 1.44e-23 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04162 - - nnu:104587467 112.464