Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04157 ATGAGAGTTCAATCAGAGGAGGAGTATGAGAAGGAGGAGGAGGAGTTGGAGGAGGAGAAGGATGATGATGATGATGATGATGAAGAAGAGGAGGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGACGAAGAAGAAGGGGATAATTTATATGTGTATGGTGAGGAGAGTGAGGATGATGAGGACAATGAAGATAGTGGAGATGAGGGTTCCATACATTTCGGTGATGAAGAAGATGCAGGTCAAAGAATGAGTATCAATGATTTTGATGATATTAAGAAAATAGATATGAAGAAGATTAGCTGTGAAGAGGTTGGTAAATGTGACTTTGAGGATTTGGAACTTGGGTATCTATTTTATTGTGAGTATGCAATGAAAAAGGGCTTTGCTGTCCGAAAAGGAAAGGTGGTTAGGAACACAAAACGCGAAATTGTGCAGAAGACATTGTTTTGTAACCGGGAAGGGAAAAGACAAAGCAATAATGTAAAAAAGCGTGAACCAAGACCTGAAGCTAGATGTGGTTGCTTTGCTATGTTTTGTCTTCGTATTGACTTTAGCGTTGGACGATGGTTTGTGAAAGAGTTTAACGATGAGCACAATCATGATATGCTAGAAGAGAAGTATTTTCGAATGATGGCAGCTCATAGGAAAATGACTGAATCTGATATAATGGAGATGAACAGTATGAGAAGTGTAGGGACGAGTGTACCTGACATATATGCATCATTTGCAAGCTGTTGTGGAGGTTATGACAGGGTTGGTATTCGTAAAAAGCATATGTACAACAAAATAGACAAACAAAGGCGGTTTCAATCAAGTGATGCCAAATTTGTTCTGAAGTATCTACGCCAAATGCGAAAGCATGATCCTCTAATGAGCTTCACACACACAATTGATGAGGAAAATAGGTTGCAACATCTTTTTTGGTGTGATGGTATTAGTCAGTTAAATTATCAACTTTTTGGTGATGTCTTAGCATTTGATGCAACATATGGGAGGAATAAATATCGGTGTCCTTTGGTTATTTTCTCTGGTGTCAATCATCAAAACCGCACAACAGTGTTTGGTTGTGTTGTTGTCGCTAATGAGACAGAAGACACATATGTGTGGCTGCTGGAACAATTCAAAGATGCAATGAGGGGGAAGTCACTGACGACTGTTATAACAGATGGTGATATGGCAATGAGGAATGCGATAAGAAAAGTATTTCCAGATGCACATCACCGTTTGTGTGCTTGGCATTTGCTTCGCAATGCAACTACCAATGTTGTCATTCCTAGTTTTCTTGAGGAGTTAGAGAAATGTATGTTTGCTAATGTTGAAGTTGGTGAATTTTTCTGTAGGTGGACAAATATGGTGAGTAAGTTTCAATTGGAGGAGAATAATTGGATGAAAGAATTGTTGGATAAGAAGCACATATGGGCTACTGCTTACAAAATAGGGCAATTTTTTGCTGGATTGAGGACCATAACTCAATGTGAGAGCTTGCATGGGCAACTTGGGAAGTTTATACAATCCTGTTACAATCTCACAGAGTTTGTTCAACACTTTCAACATTGTCTTTGCTATATACGATATAAAGAAAAGGAGGATGACTTTGCATGTATGTTGGGTGAAGCAGTTTTGAGAACAAATTTGCAGCCGTTGGAACGGTCAGCTTCCAGACATTTCACAAGGAATATATTCTTCATATTTCGCAAAGTCTTATTTAGAGTTGCACAGAACTTTGTTGTTGGTTGCAGGGAGTCAGCGATTTGGAGCATTTACACTGTTAAGAGATACCAAAGTGGCGGGAAAGAATGGTTTGTGTCTTTGTATGCACCATCAGAAGAATTCAAATGTTCTTGCCAGCGAATGAAGTCATATGGGTTGCCCTGCCCCCACATTGAATGTGTTTTGGTTTACCTAGACTATGGCGAACTTCCTCAAAGTTTAATACTTGAGAGGTGGACCAAACGTGCGAAGGACTCAATTCGTAAGATGTTCATTAGTAGCTCACACTATTGGGACTCACCGTTGATTGATCGTTATGCCGCCATGTTAGAGCAGTGCAGACGGTTATGTAATCTAGTTGCTCGATATGATGAAGAGTTTAATTGTATTAGGGAATGGATAACTTCAAAGATACAACTGTTGAGTCTCAAAGGATTAAATATATGA 2169 0.3965 MRVQSEEEYEKEEEELEEEKDDDDDDDEEEEEEEEEEEEEEEGEEDEEEGDNLYVYGEESEDDEDNEDSGDEGSIHFGDEEDAGQRMSINDFDDIKKIDMKKISCEEVGKCDFEDLELGYLFYCEYAMKKGFAVRKGKVVRNTKREIVQKTLFCNREGKRQSNNVKKREPRPEARCGCFAMFCLRIDFSVGRWFVKEFNDEHNHDMLEEKYFRMMAAHRKMTESDIMEMNSMRSVGTSVPDIYASFASCCGGYDRVGIRKKHMYNKIDKQRRFQSSDAKFVLKYLRQMRKHDPLMSFTHTIDEENRLQHLFWCDGISQLNYQLFGDVLAFDATYGRNKYRCPLVIFSGVNHQNRTTVFGCVVVANETEDTYVWLLEQFKDAMRGKSLTTVITDGDMAMRNAIRKVFPDAHHRLCAWHLLRNATTNVVIPSFLEELEKCMFANVEVGEFFCRWTNMVSKFQLEENNWMKELLDKKHIWATAYKIGQFFAGLRTITQCESLHGQLGKFIQSCYNLTEFVQHFQHCLCYIRYKEKEDDFACMLGEAVLRTNLQPLERSASRHFTRNIFFIFRKVLFRVAQNFVVGCRESAIWSIYTVKRYQSGGKEWFVSLYAPSEEFKCSCQRMKSYGLPCPHIECVLVYLDYGELPQSLILERWTKRAKDSIRKMFISSSHYWDSPLIDRYAAMLEQCRRLCNLVARYDEEFNCIREWITSKIQLLSLKGLNI. 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04157 722 Coils Coil 2 51 - -
Seca2g04157 722 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 111 701 IPR031052 GO:0006355
Seca2g04157 722 MobiDBLite consensus disorder prediction 8 70 - -
Seca2g04157 722 ProSiteProfiles Zinc finger SWIM-type profile. 592 640 IPR007527 GO:0008270
Seca2g04157 722 MobiDBLite consensus disorder prediction 71 89 - -
Seca2g04157 722 MobiDBLite consensus disorder prediction 1 89 - -
Seca2g04157 722 Pfam MULE transposase domain 327 421 IPR018289 -
Seca2g04157 722 Pfam FAR1 DNA-binding domain 122 207 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04157 Seca-Chr2 125298322 125300512 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g04157 MULE 2.5e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04157 - - tpra:123913749 653.284