Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04140 ATGCTCTGTTCCACTCCTTATTCCCTACTCGCTACCATTATTTTCTCAGCGCTAATCCTTCTTCATCCATCAAATGCTCAATTGAGTTCAACCTTCTACTCCAACACATGCCCCAATGTGTCTTCTATAGTGACAAGTGTTATTCAGCAGGCTCTGCAATCTGATCCTCGTATTGGCGCAAGCCTAACTCGTCTTCATTTTCATGATTGCTTTGTTAATGGATGTGATGCATCGGTTTTGTTAGATCAGAGTGGCAACATAACACTGAGTGAGAAAAATGCAACTCCGAACAATAATTCAGCTCGTGGCTTTGATGTAGTTGATAACATTAAGACCTCCCTTGAAAATTCATGCCCTGGTGTCGTTTCTTGTGCGGATATTCTTGCCCTTGCTGCAGAAGCTTCTGTATCTTTGGGAGGAGGTCCTTCATGGAGCGTACTACTTGGTAGAAGGGATGGTCTAATTGCAAACCAATCTGGTGCCAACACCTCTATTCCCACTCCATTTGAAAGCCTAGCTAACATCTCAGCCAAATTTGCTGCCGTTGGCCTAAACACAACTGATCTCGTTGCATTATCTGGTGCACATACATTTGGTCGTGCACAATGTCGATTTTTCAACCAGAGGCTGTTCAATCTTAGTGGCACAGGTAGCCCTGATCCTACACTGAACTCAACATATCTGGCTACTCTGCAGCAAAATTGTCCACAAAATGGAAATGGGACCACTCTCAACAACCTTGACCCTTCATCCCCAAATACTTTTGACAACAATTACTTCAAAAATCTTCTTAACAATCAGGGCCTTCTCCAATCAGATCAAGAGCTATTTTCCACTAATGGCTCTGCTACAATCTCCATTGTTAACAACTTTTCCAGCAACCAGAGTGCCTTCTTCCTAGCCTTTGCTCAGTCCATGATTAATATGGGTAATATTAGCCCATTGACAGGAAATCAAGGAGAAATCAGATCCAATTGTAGGAAAGTCAATGGAAGTTGA 999 0.4264 MLCSTPYSLLATIIFSALILLHPSNAQLSSTFYSNTCPNVSSIVTSVIQQALQSDPRIGASLTRLHFHDCFVNGCDASVLLDQSGNITLSEKNATPNNNSARGFDVVDNIKTSLENSCPGVVSCADILALAAEASVSLGGGPSWSVLLGRRDGLIANQSGANTSIPTPFESLANISAKFAAVGLNTTDLVALSGAHTFGRAQCRFFNQRLFNLSGTGSPDPTLNSTYLATLQQNCPQNGNGTTLNNLDPSSPNTFDNNYFKNLLNNQGLLQSDQELFSTNGSATISIVNNFSSNQSAFFLAFAQSMINMGNISPLTGNQGEIRSNCRKVNGS. 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04140 332 FunFam Peroxidase 166 309 - -
Seca2g04140 332 SUPERFAMILY Heme-dependent peroxidases 27 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 Pfam Peroxidase 45 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 Gene3D - 32 330 - -
Seca2g04140 332 PANTHER PEROXIDASE 72-RELATED 22 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Seca2g04140 332 CDD secretory_peroxidase 27 329 IPR033905 GO:0004601|GO:0042744
Seca2g04140 332 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04140 332 Gene3D Peroxidase, domain 2 166 309 - -
Seca2g04140 332 FunFam Peroxidase 31 178 - -
Seca2g04140 332 ProSiteProfiles Plant heme peroxidase family profile. 27 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04140 Seca-Chr2 124834531 124837295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04140 24 332 Peroxidase AT5G06720 76.052 3.77e-171 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04140 K00430 - gmx:100810355 577.785