Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04139 ATGCTGCTCCTCCCACCGCACCAAAATCTTCTCTGCTACATCATGCTGCTGCAGCACCATCGAGCTTGGATCGTTATCAGCCGTCTGATCAACCACTCCCACCGATCGGGAAACGAAGCAACGGCTCTGATGATCCCTCCGGCGAAAGTGGGGCACACAGACAGCACAACAAGCAAGACCCTTTGGATGAGGATGTTAGAAAGCAAGATATTGAAGATTCAGGAGAGAAGGTCAATCATACCAGGAAAGGAAGCAACTTTGGTTTGGAAATGCATGCTGAGGTCTTCCCACTTTCAAGCCCTTCTTCTGCTCAAGGATGAGAGATGGTGCGAAGGAGAGAAAGCTATTCCCTTGAAGAAAAGAAGAGGGAGTTTCGACAATGGTATCACTCTAGGCAATAGTAAGAAGATGGTGAAGCCTAAGATGAAGACAAAGATGAACAAGAAATGTTCAACTCGAAATGACAATAATATGGAACAAGAAGAAGAAGATGAAGATGATGAAAAAGAAGAGGTACATGAAACAAAACCCAATAAGAAGAGGGCAAGGGGTGGTGCACTCATGGAAGGTTCAAGGTGCAGTCGTGTTAATGGGAGAGGATGGAGGTGTTGTCAACAAACACTTGTGGGTTATTCTCTGTGTGAGCATCACTTAGGGAAGGGAAGGCTTAGAAGCATGACAAGTGTTCGAAGCCGTTCTATTGCTACTTCTATTGCACCAAAGAAGGTACTTGATGCTTCTCTATCTTTATCAGTACCTAGTGCTTCATCTTCTTCTCTTGATAAGCAAAACAACAAGTCTGTTATTGTTACTGATCCTGCTGAGAATGATGAGAAGAAGCCAGTGATAATCACAAAGAAGAGGATGAAGCTGGGAATGGTGAAAGCAAGGTCCATAAGCAGCTTGTTGGGACAACCAAACACACAGGTTGTTGTGTCTGAGAAGAGTAACAACTAA 957 0.4431 MLLLPPHQNLLCYIMLLQHHRAWIVISRLINHSHRSGNEATALMIPPAKVGHTDSTTSKTLWMRMLESKILKIQERRSIIPGKEATLVWKCMLRSSHFQALLLLKDERWCEGEKAIPLKKRRGSFDNGITLGNSKKMVKPKMKTKMNKKCSTRNDNNMEQEEEDEDDEKEEVHETKPNKKRARGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIATSIAPKKVLDASLSLSVPSASSSSLDKQNNKSVIVTDPAENDEKKPVIITKKRMKLGMVKARSISSLLGQPNTQVVVSEKSNN. 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04139 318 Pfam WRC 189 229 IPR014977 -
Seca2g04139 318 ProSiteProfiles WRC domain profile. 187 231 IPR014977 -
Seca2g04139 318 PANTHER EXPRESSED PROTEIN-RELATED 105 303 - -
Seca2g04139 318 MobiDBLite consensus disorder prediction 139 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04139 Seca-Chr2 124790882 124792964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04139 176 229 GRF Transcription Factor Family AT3G52910 35.185 5.69e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04139 - - gmx:100810559 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04139 2 124790882 124792964 Seca2g04139 2 124790882 124792964 ECH
Seca8g04966 8 137794429 137797178 Seca2g04139 2 124790882 124792964 PCT