Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04134 ATGTTTTCGTGGGCTCAAAAGTTATTGTGTGCGTGCACTAGCCTGAATGAAGTTGACGATGACCCTCTGATGTGGAACAGGGACCTCGAGAGGCATTCCTGTGGTGATTTCTCCATGGCTGTGGTTCGTGCCAATGAACAAATGGAGGATTTCGCCCAGGTTGAGACTGGCCGTAATGCAGTCTTCGCCGGAATTTACGATGGCCATGCCGGTGACGATGCTTCCCGCTATCTCAACAATTACCTCTTCGAGCATCTAATAGGGTTTATTCAGGAGAGTCGTGATATGTCTGAAGTGGTTCTAAGGGATGCTGTTGTTGCTTCGGAGGTTGGGTTTCTGGAAGTTGTTCGACTGGGTTATGGGGTAAAGCCAGCGATGGGTAAAGTTGGTTCGTGTTGTCTGGTTTGTTGTATCTGGAGAAATACACTACATATCGCCAACCTTGGAGATTCCCGTGCTGTTCTTGGTACTCTGGATAGCAGGAACAGGATAACTCCTCTCCAGTTAAACCAAGAGCACAATCTCAGTGTAAAAGAGGTCAGAGATGAACTCAGGATTGCCAATCCAGATGATCCCGGAATTGTGCTTCACACTCGTGGAGCATGGCGCGTTAAAGGCATCATCGAGGTAAGCAGAACTATAGGAGATGCATATTTGAAGCGGCCACCGTTCACTTTAGAACCAAATTTCCCAGACTTCCAGGTGCCTAAACCTTTTGAACGACCAGTGCTGTCAGCAGAACCATTTGTTCACACAAGAGCATTACGAAACCAGGATAGATTCGTTATACTTGCATCAGATGGACTTTGGGATCACATGACAAGTCAGGAAGCAGTTAACATTGTACATGGAAATCCACGAAATGGGATTGCAAAAAGACTTGTTAAGACTGCTCTAAGGGTGGCAGCTGGTAAAGTGAACAGAAGATATAGAGAGCTTGTTACGATTGAACCGGGAAAGGACGGCAGGCGCGCTATTCATGATGATATCAGTGTCATTGTTATCTTCATAAACCATCAGTTACTTGGGACGGGAAATTATGTCCCAGAGTTGTCCTTCAAATGCTTCATTGAGCACGCTCTACCATCAGATTTTAGAAAAGTCCGCGATTTGCTGTCATGA 1122 0.4599 MFSWAQKLLCACTSLNEVDDDPLMWNRDLERHSCGDFSMAVVRANEQMEDFAQVETGRNAVFAGIYDGHAGDDASRYLNNYLFEHLIGFIQESRDMSEVVLRDAVVASEVGFLEVVRLGYGVKPAMGKVGSCCLVCCIWRNTLHIANLGDSRAVLGTLDSRNRITPLQLNQEHNLSVKEVRDELRIANPDDPGIVLHTRGAWRVKGIIEVSRTIGDAYLKRPPFTLEPNFPDFQVPKPFERPVLSAEPFVHTRALRNQDRFVILASDGLWDHMTSQEAVNIVHGNPRNGIAKRLVKTALRVAAGKVNRRYRELVTIEPGKDGRRAIHDDISVIVIFINHQLLGTGNYVPELSFKCFIEHALPSDFRKVRDLLS. 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04134 373 PANTHER PROTEIN PHOSPHATASE 33 335 IPR015655 GO:0004722|GO:0006470
Seca2g04134 373 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Seca2g04134 373 ProSiteProfiles PPM-type phosphatase domain profile. 33 337 IPR001932 -
Seca2g04134 373 CDD PP2Cc 37 337 IPR001932 -
Seca2g04134 373 SUPERFAMILY PP2C-like 37 338 IPR036457 -
Seca2g04134 373 Pfam Protein phosphatase 2C 59 303 IPR001932 -
Seca2g04134 373 Gene3D - 20 343 IPR036457 -
Seca2g04134 373 SMART PP2C_4 30 335 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04134 Seca-Chr2 124736045 124737893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04134 23 365 PP2C-type Phosphatase Gene Family AT5G06750 54.885 5.15e-129 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04134 K01102 - gmx:100778238 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04134 2 124736045 124737893 Seca2g04134 2 124736045 124737893 ECH
Seca2g04134 2 124736045 124737893 Seca12g05834 12 150032745 150041437 ECH