Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04132 ATGGGAATGGACAGAGTGCAAAGTGCCTATGAGCCCTTGGATGAAGCGTTTGAAATTGGGAAAGAGTCGTATCGGGGGCAGCAATACAGCCAGATTTACTTCGCTCGCCTTCACTTGATGAGAACACTCTTGTATTCCCTTGTCCCCCATTGGAAACCCAATTTTCCTGTATGCACAGTGTTGGGATTGGAAGAGGGCAAGGAGTGTATCATTGTTGGAACCCTCTATAAACACATGAAGCTCAAACCTTGCATACTTGATGAGTATTCCAAGCAGAAAACGGTGGTTCCACTTGTCAGACCGCATAACTTTGTGCACGAAGATGATTATCTAGTTTTGGAAGATGAAAGTGGGAGAGTTAAGCTCTGTGGGAGTGACATTTCACCATCTGTGTATGTAACAGGAATAGTGGTTGCTTTACATGGAAAGGAAACAGGGGCAGGTGAATTTTTGGTTCATAATGTTCTAGAAGCTGGGTTACCACCACAGATAGAATTTCCTCTTCAATCAAGGGAAGACAAATATGTTGTTCTTGTGTCAGGATTAAGTGTTGGGAGCAGCAACTCTAATCCTCTTCAATTTCAGCTTCTCATTGATCATATTACTGGGCATTTAGGAGATGAGAAGGAGCAAAGTATTGCATCGCAAATTGTTCATGTGGTCATAGCTGGAAATTCGGTTGAAATACCTCGCGGACTAGTTAATGGACAGAATTTGGCCTCAAAAGATCTCTCGAGAATCTCAGAACCAATAAAGGAGCTAGATATTCTGTTGAATCAGATTACTGCTGGTTTGCCTTTGGATATCATGCCAGGCCCCAATGATCCTTCTAATTACTCATTGCCACAGCAGGTTCTTATGTTGTCCTTTAACAGTATATATATGCCATATACAACATTTGCTGTTTGA 909 0.4202 MGMDRVQSAYEPLDEAFEIGKESYRGQQYSQIYFARLHLMRTLLYSLVPHWKPNFPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKQKTVVPLVRPHNFVHEDDYLVLEDESGRVKLCGSDISPSVYVTGIVVALHGKETGAGEFLVHNVLEAGLPPQIEFPLQSREDKYVVLVSGLSVGSSNSNPLQFQLLIDHITGHLGDEKEQSIASQIVHVVIAGNSVEIPRGLVNGQNLASKDLSRISEPIKELDILLNQITAGLPLDIMPGPNDPSNYSLPQQVLMLSFNSIYMPYTTFAV. 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04132 302 Gene3D - 34 158 - -
Seca2g04132 302 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 6 295 IPR024826 -
Seca2g04132 302 Pfam DNA polymerase delta subunit OB-fold domain 28 154 IPR040663 -
Seca2g04132 302 Gene3D - 167 300 - -
Seca2g04132 302 FunFam DNA polymerase delta subunit 2 34 158 - -
Seca2g04132 302 Pfam DNA polymerase alpha/epsilon subunit B 176 286 IPR007185 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04132 Seca-Chr2 124720325 124726876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04132 4 300 Core DNA Replication Machinery Family AT2G42120 72.727 5.73e-161 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04132 K02328 - gmx:100780072 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04132 2 124720325 124726876 Seca2g04132 2 124720325 124726876 ECH