Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04120 ATGTTTCAGCATTCTTCCAAGATGTACGGAACTCAATGGGAACCCCACATAGAGATTAGCAACTTAGCCAAGGTTGTTGGAACAGAACACCTGAGTTTTGATCCCATCAAATCACCCTGCAACATTGTGACATCTCCTCTTCAAACACCACCTGGTTTTTGTGCAAGTGCAGCTAAGAGTCTTGTGAGCTTTGAAGCTCAAGAACATGAGCAGCATCAGATTGGTGTTCCTGCTTGGTGTTTTGAGTTTCCAGAGACTACAGAGTCCCCCATGTTGGTTTGCCAAGCCTCAGGAGATAACTTCACCAAACAAGATCAACATGTTTCTCAATTCACAAGCTCCTTGTACTCAGTTGCTGAATCTTTATGGTCTAGCAGTGAAGATAGTCATTCTTCTTCTGAAATGAAATATAGTGACTTACAGCCTGATAAATTACTGAGGGATGATGCTGCCACCAATAAGAGGCCCTTTGAAATTTCCTTTCAGAGAAATCAGTTGGCCTCATGTGCAAAGCAAGAAGAGCAGGCTCCTGGACTTTGTGGGGTTGCCTGTGTCACTTCTAGCAACTCTGCTTCTAGGAGAGCTCTAACAGGTAAAAGAAGAATAAGATGGACCAAGGATCTTCATGAGCCATTTATGATGATTGTTGATAGCCTTGGTGGTCCAGAAAAGGCAAAGCCCAAGGCCATACTAGAGATGATGAAAACGGATTTGCTGTCCATTTCTCACGTTAAAAGTCATTTGCAGAAATGTAGGTCTACAATACAAATGCACAAAGCTTTGCAGGGTAAATTACTTTCTGTCATTGTCAGTGTGTCTAACATTACAGCAGTGCATACCTCATGA 846 0.4255 MFQHSSKMYGTQWEPHIEISNLAKVVGTEHLSFDPIKSPCNIVTSPLQTPPGFCASAAKSLVSFEAQEHEQHQIGVPAWCFEFPETTESPMLVCQASGDNFTKQDQHVSQFTSSLYSVAESLWSSSEDSHSSSEMKYSDLQPDKLLRDDAATNKRPFEISFQRNQLASCAKQEEQAPGLCGVACVTSSNSASRRALTGKRRIRWTKDLHEPFMMIVDSLGGPEKAKPKAILEMMKTDLLSISHVKSHLQKCRSTIQMHKALQGKLLSVIVSVSNITAVHTS. 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04120 281 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 174 256 IPR046955 GO:0003700
Seca2g04120 281 SUPERFAMILY Homeodomain-like 198 255 IPR009057 -
Seca2g04120 281 Gene3D - 198 255 - -
Seca2g04120 281 NCBIfam myb-like DNA-binding domain, SHAQKYF class 199 253 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04120 Seca-Chr2 124498060 124500985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04120 198 272 G2-like Transcription Factor Family AT5G06800 50.667 2.58e-18 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Seca2g04120 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04120 - - gmx:102662952 331.643