Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04111 ATGAGTCCCCAAAACAACTTCCTATCCCTTTTGGTTCCCCTGGCTGCAATCTTTGCATCTCTGTATCTCATAAATCCAAATCCACAGTTCCTCCAAAATTTCACATACTTCACTCTCACAACTTTGTCACCATCATCTATGTACTTGTCACTTCCTTTAACTCACAACCATCATCATAGACCACACAAGAAACACCCTGATAGTGGAAATAATGCTAGTTCTAATATTTGTGATGATTTTCCACCAGGCATTCCACCTCCAAACACCAATACCTCTTCATATCTTTGTGTTGATCGAAAAGGGTGTTGTAATTTCACAACAGTACAAGCAGCCGTTAATGCAGTTCCAGATTTCAGCTTAAAAAGAATCATAATATGGATTAATAGTGGCATCTATTATGAGAAAATCATGGTGCCTAGAACCAAACCCAACATTACATTTCAAGGACAAGGCTACACTTCAACAGCAATTGCATGGAATGATACTGCAAAGTCAGCAAATGGCACGTTTTATAGTGGCTCTGTACAAGTTTTTGCCTCTAACTTCATTGCTAAAAACATAAGCTTCATGAATTTAGCACCAATTCCGGTCCCTGGGGCTGAAGGAGCACAAGCAGTAGCCATTAGAATATCAGGGGATCAAGCTGAATTCAGGGGTTGTGGATTCTTTGGAGCACAAGACACCCTTCATGATGATAAGGGTCGTCATTACTTCAAAGATTGCTATATTCAAGGCTCCATTGATTTCATATTTGGCAATGCAAGGTCACTCTATGAGAATTGTCAATTAGTTTCTATAGCGAATCCAGTGCCACCGGGGCAAAAGAGCATAAATGGTGCTATTACAGCTCATGGTAGAGTTTCAGGGGATGAAAATACAGGATTTGCATTTGTAAACAGTACAATAGGAGGCAACGGAAGAATATGGTTGGGTCGAGCATGGAGGCCATATTCCCGTGTTGTTTTTGCCTTCACAGTAATGTCAGATATCATTGCCCCTGAAGGTTGGAATGATTTCAATGACCCAACAAGAGACCAGACTATATTCTATGGAGAGTACAATTGCTCTGGGCCGGGGGCTAATATGGCATTGAGGGCACCTTATGTACAGAGATTAAACGATACACAAGCTTTTCCATTCCTCAATACAAGTTTTATTGATGGAGAGCAATGGTTGGAAACTTAG 1185 0.4068 MSPQNNFLSLLVPLAAIFASLYLINPNPQFLQNFTYFTLTTLSPSSMYLSLPLTHNHHHRPHKKHPDSGNNASSNICDDFPPGIPPPNTNTSSYLCVDRKGCCNFTTVQAAVNAVPDFSLKRIIIWINSGIYYEKIMVPRTKPNITFQGQGYTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNLAPIPVPGAEGAQAVAIRISGDQAEFRGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGNARSLYENCQLVSIANPVPPGQKSINGAITAHGRVSGDENTGFAFVNSTIGGNGRIWLGRAWRPYSRVVFAFTVMSDIIAPEGWNDFNDPTRDQTIFYGEYNCSGPGANMALRAPYVQRLNDTQAFPFLNTSFIDGEQWLET. 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04111 394 MobiDBLite consensus disorder prediction 58 82 - -
Seca2g04111 394 FunFam Pectinesterase 89 394 - -
Seca2g04111 394 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 83 393 - -
Seca2g04111 394 Pfam Pectinesterase 97 388 IPR000070 GO:0030599|GO:0042545
Seca2g04111 394 SUPERFAMILY Pectin lyase-like 92 392 IPR011050 -
Seca2g04111 394 ProSitePatterns Pectinesterase signature 2. 243 252 IPR033131 -
Seca2g04111 394 Gene3D - 88 394 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04111 Seca-Chr2 124140626 124144303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04111 75 393 Carbohydrate Esterase AT1G05310 73.041 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04111 - - gmx:100806629 698.738