Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04047 ATGGCTCCTGATGTAATAAAGCGAAATTATGGCCTAGAAGTAGATATTTGGAGTGCAGGAGCAATTCTATACATCTTGCTTCTTGGTGTCGCACCGTTTTGGGCAGGTTAA 111 0.4234 MAPDVIKRNYGLEVDIWSAGAILYILLLGVAPFWAG. 37
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04047 36 Gene3D Transferase(Phosphotransferase) domain 1 1 34 - -
Seca2g04047 36 SUPERFAMILY Protein kinase-like (PK-like) 1 35 IPR011009 -
Seca2g04047 36 ProSiteProfiles Protein kinase domain profile. 1 36 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g04047 36 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04047 Seca-Chr2 122850825 122850935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04047 1 35 EF-hand Containing Proteins AT3G57530 82.857 1.32e-16 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca2g04047 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04047 K13412 - lsv:128126706 66.6254