Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04031 ATGGCTCGTCAAATCAAAGACATTAGGGATAGATTGGATAAGGTAGCAGCTGATGGAAACAAGTTTGGCCTTGAGAGAGTTGATGTTGATCCCAGGCTTAGTGTGCAAATGAGAGAAATGACTCACTCTCATGTTCATGCTTTAGATGTGATAGGAAGGGAGAATGAAAGGGAAGAAATTATCCAGCTTTTGATGCAACCCCACCCTCGTGGGGATGCTGATGGTGTTAGAAGTCTGCAAATAATTATTAAAATCATAAACTCTGCTTTAGCTTCAGCTCCAGCCACTGCTCTTGCTCACCAAGAAAACATTAACAACTTAGATATTGAACAGCTACAAAGTCGTCTTCGATATAAACTTTCTGGTCAAAAGTTTTTGCTTATCTTAGATGATATATGGAATGAGGATCGTGCAAAATGGATTCAATTGAAAGATTTAATAAAAGTTGGTGCAGTAGGAAGCAAAATATTAGTGACAACACGTAATAATTCAATTGCTTCAATGATGGGCACTGTTCCCTCGTATGTTTTAGAAGGACTTTCTCTGGAGAACTGTTTATCTTTGTTTGTCAAATGGGCATTTAAGGAAGGAGAAGAAGAAAAATATTCAAATCTAACGGAGATAGGAAAAGAAATTGTGAAAAAGTGTCGAGGGGTTCCACTAGCAGTGAGAACATTAGGAAGTTCCCTGTTCTCAAAATTTGATTTAGATAAGTGGAAATTTGTAAGAGACTCTGACATATGGAGTATAAGGCAAAATAGAGATGACATTTTACCTGCTCTTAAGTTAAGCTATGATCAAATGCCATTTCATTTAAGGCACTGTTTCGCATACTTCTCTCTTTATCCCAAAGATTTTGGCTTCACTAGTGTTCAAATTACTAAACTCTGGACAGCACTTGGATTAATTCACTCCCAGGATGGAAGTCAAAAGCTAGAGAATATTGCAAATGAATATATAGATGAGTTACATTCAAGATCATTTCTTCAGGATTTTGAGGACTTTGGCCACTTTTACTATTTCAAATTACATGATTTGGTTCATGATCTTTCACTGTATGTTGCGAAAGAGGAGTGTGTAGTTGTAGACTCCCAAACTCGGAATATACCTGAGCAAGTTAGGCATTTATCAATTGTTGAAAATAATTCACTTGCCCATGCTTTGTTCCCGAAGTCCAGTAGTGTGAGAACTATACTATTTCCCATTGAAGGAGTGGGTCTTGACAGTGAAACTGTTTTGGATACATGGGTATCAAGATACAAGTACTTACGGGTTTTAGGTTTAAGTGATTCTTCATTTGAGGCTCTATCTAATTCAATTGCTAAATTGGAGCATCTGCGAGTTCTCAATCTTTCTAATAACTGCAAGATCAAAGGACTTCCTCCTTCTATATGCAAACTCCAAAATTTGCAAGTTTTGTCACTCAGTGGATGCAAGAAGCTTGAAACATTGCCTAAAGGATTAGGGAAGCTGATCAACCTTCGACAATTGTATATAACCACAAATCAATCTGTTCTGTCCCTGGATGAACTTGCAAGCTTGAGCAATCTTCAAACTTTGAGCTTTGAGTATTGTAACAATTTGCAGCATTTGATCGGAGGGAAACAACTCACTTCCCTTGAAGCACTGATTGTTCAATCATGTGGGAGCCTTGTGCTCATTCCTCTTGATATTCTCCCTAAGTTAGAGGCTCTATTAGTTACAGGCTGTGGTAGGCTGAAACTGTCAGAACACTCAGAGAATCACGAAATTATGGCATTGACAATCAATAAATTGAGGCTGAAATTTCTTCATCTTGAGTATTTTCCAAGGCTAGAGACATTACCTGAATGGATTGAAGGAGCTGCAGAGACTTTACAGACCTTGATAATTATAAACTTTCCTGAGCTTTGGATGCTTCCTGAGAGTCTGACAAGAATGACTCATCTTAAGATGCTCCATATTTCTAACTGTCCTCAACTGTATTATCTTCCAAGTGGCATGAAACGCCTTACTACCCTTGGTACTTTGACCATAGATGGTTGTCCTGTATTGGGTCGAAAATGTCATCCAAAATCTGGTGAGTACAGGCACATGATTGCTCACATCAAACGCATTTCCATTGGAGAACCAAAAGAAGACGAGGAACCATTCTCCCAAAATGAAAGCATCAACTGA 2157 0.3825 MARQIKDIRDRLDKVAADGNKFGLERVDVDPRLSVQMREMTHSHVHALDVIGRENEREEIIQLLMQPHPRGDADGVRSLQIIIKIINSALASAPATALAHQENINNLDIEQLQSRLRYKLSGQKFLLILDDIWNEDRAKWIQLKDLIKVGAVGSKILVTTRNNSIASMMGTVPSYVLEGLSLENCLSLFVKWAFKEGEEEKYSNLTEIGKEIVKKCRGVPLAVRTLGSSLFSKFDLDKWKFVRDSDIWSIRQNRDDILPALKLSYDQMPFHLRHCFAYFSLYPKDFGFTSVQITKLWTALGLIHSQDGSQKLENIANEYIDELHSRSFLQDFEDFGHFYYFKLHDLVHDLSLYVAKEECVVVDSQTRNIPEQVRHLSIVENNSLAHALFPKSSSVRTILFPIEGVGLDSETVLDTWVSRYKYLRVLGLSDSSFEALSNSIAKLEHLRVLNLSNNCKIKGLPPSICKLQNLQVLSLSGCKKLETLPKGLGKLINLRQLYITTNQSVLSLDELASLSNLQTLSFEYCNNLQHLIGGKQLTSLEALIVQSCGSLVLIPLDILPKLEALLVTGCGRLKLSEHSENHEIMALTINKLRLKFLHLEYFPRLETLPEWIEGAAETLQTLIIINFPELWMLPESLTRMTHLKMLHISNCPQLYYLPSGMKRLTTLGTLTIDGCPVLGRKCHPKSGEYRHMIAHIKRISIGEPKEDEEPFSQNESIN. 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04031 718 PANTHER DISEASE RESISTANCE PROTEIN RP 66 608 IPR044974 GO:0006952
Seca2g04031 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 278 IPR027417 -
Seca2g04031 718 Gene3D - 70 174 IPR027417 -
Seca2g04031 718 Gene3D Ribonuclease Inhibitor 617 699 IPR032675 -
Seca2g04031 718 SUPERFAMILY L domain-like 342 683 - -
Seca2g04031 718 Gene3D - 264 352 IPR036388 -
Seca2g04031 718 Pfam Leucine rich repeat 422 479 IPR001611 GO:0005515
Seca2g04031 718 PRINTS Disease resistance protein signature 465 481 - -
Seca2g04031 718 PRINTS Disease resistance protein signature 216 230 - -
Seca2g04031 718 PRINTS Disease resistance protein signature 119 133 - -
Seca2g04031 718 Pfam NB-ARC domain 83 266 IPR002182 GO:0043531
Seca2g04031 718 Gene3D Ribonuclease Inhibitor 402 616 IPR032675 -
Seca2g04031 718 Gene3D - 179 263 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04031 Seca-Chr2 122613177 122615443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04031 114 675 WRKY Transcription Factor Family AT5G45050 21.280 5.53e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04031 - - gmx:100794422 979.548