Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03999 ATGAGGCTTCCTTCTAAAATGACCAACAAAGAGATAAATAAAGTGGTGGAAGAAACACTAACGGAAATGGGTCTGGAAGATTGTGCAGATAACAATATTGGGAATTGGCATTTAAGGGGTATTAGTAATGGTGAAAAGAAGAGACTAAGCATTGGCCTAGAAATGATGACACAACCTCAAGTTTTACTCCTTGATGAACCAACTAGTGGACTTGATAGTGCCTCAGCTTTCTATGTGATCCAAGCTCTACGCAACATAGCTTGTAATGGAAAGATAGTTATGTGTTCCATTCACCAACCCAGTAATGAAAGTTTTAATCTTTTTGATGATTTGCTTTTGCTCTCATGTGGGGAAACTGTTTATTTTGGAGAAGCAAAGATGGCTCTAAAGTTTTTTTCTGATGCAGGGTTCCCCTGTCCTATAAGAAGGAATCCTTCAGATCATTTCCTTTTGTGTATTAATTTGGACTTTGACTTGATTACTGAAGCACTAGCAAAAACACAATTAAGTCTGGTAAGTTTAATGTCATCAAATTCATCAATGGGAATGAGAACAACAGAGATTCGAGGGAAGCTTATTGAGAGATACAAAAATTCAGAGCTAATGAGCAATACCAGAAGAAGAATTCAACAACTCAAATCCAATGAAGAACAAGTAATTGAGTCCAATGTAAGGAGCAGTACCACCTGGTGGAAGCAACTTTGCACATTGACCAAGCGATCTTTCCTAAACATGACTAGGGACTTGGGATACTACTGGCTGAGGATAATATTTTACACATTGGTAGCAATCTGTGTTGGCACCCTTTTTTTTCATATTGGCACAGACAACTCCTCAATCTTGGCTAGAGGAAAGTGTGTATCATTCATCTATGGGTTCATGATATGTTTGTCATGTGGAGGATTACCATTTTTCATTGAAGAATTGAAGGTGTTCTATGGTGAAAGGTCCAAAGGGCATTATGGAGAGGCTGCATTTGTTTTATCAAACATTATTTCATCATTCCCTTTCCTTCTTCTAATATCACTCTCCTCTGGAATAATTATTTACTCCATGGTGCAATTTCATCCGGGTTTAACTAATTGTACATTTTTCTGCATCAACTTATTCTGCTGCCTTTCTGTTGTTGAAAGCTGCATCATGGTTGTAGCCTCAGTGGTCCCCAATGTGTTGATGGGTATAGGAACTGGAACTGCTGTAATAATTTTCATGATGATGTCCTCCCAAATATTCAGACCACTATCTGACATTCCAAAGTTCTTTTGGCGCTATCCCATGTCCTACCTCAGTTTTGCTACTTGGGCAGTGCAGGGCAGTACAAAGAATGACATGTTGGGGGTTGAATTTGATCCTCTCTTACCTGGGGAACCAAAAGTTACTGGAGAACAAATCCTATCATTGGTGTTTGGGGTTCCATTGAATCATGACAAATGGTGGGACTTAACAGCTTTGGTTACTTTATTGATAGTTCACAGATTGCTTCTTTTCTTAGTGCTTCGGTATAACAAAAGATCGATATCACCCGTTCTGTGGTTTTATGCCAAGGAAAGTCTACACCTTATTACAAAACGATTTTTAGTCAGTAATAAGCCATCGTTCTCTTCAAGGAAACAAGAAGTTCCGCGTCCATTATCGTCTCAAGAGGGTGTAATGCCCCCAAACCTTGCAACAAAATAA 1677 0.3882 MRLPSKMTNKEINKVVEETLTEMGLEDCADNNIGNWHLRGISNGEKKRLSIGLEMMTQPQVLLLDEPTSGLDSASAFYVIQALRNIACNGKIVMCSIHQPSNESFNLFDDLLLLSCGETVYFGEAKMALKFFSDAGFPCPIRRNPSDHFLLCINLDFDLITEALAKTQLSLVSLMSSNSSMGMRTTEIRGKLIERYKNSELMSNTRRRIQQLKSNEEQVIESNVRSSTTWWKQLCTLTKRSFLNMTRDLGYYWLRIIFYTLVAICVGTLFFHIGTDNSSILARGKCVSFIYGFMICLSCGGLPFFIEELKVFYGERSKGHYGEAAFVLSNIISSFPFLLLISLSSGIIIYSMVQFHPGLTNCTFFCINLFCCLSVVESCIMVVASVVPNVLMGIGTGTAVIIFMMMSSQIFRPLSDIPKFFWRYPMSYLSFATWAVQGSTKNDMLGVEFDPLLPGEPKVTGEQILSLVFGVPLNHDKWWDLTALVTLLIVHRLLLFLVLRYNKRSISPVLWFYAKESLHLITKRFLVSNKPSFSSRKQEVPRPLSSQEGVMPPNLATK. 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03999 558 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 147 IPR027417 -
Seca2g03999 558 Pfam ABC-2 type transporter 233 442 IPR013525 GO:0016020|GO:0140359
Seca2g03999 558 Coils Coil 202 222 - -
Seca2g03999 558 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 522 - -
Seca2g03999 558 Pfam ABC-2 type transporter 98 186 IPR043926 GO:0140359
Seca2g03999 558 Pfam ABC transporter 11 69 IPR003439 GO:0005524
Seca2g03999 558 Gene3D - 2 135 IPR027417 -
Seca2g03999 558 MobiDBLite consensus disorder prediction 534 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03999 Seca-Chr2 121885107 121888590 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03999 25 83 Calmodulin-binding Proteins AT2G36910 44.068 3.87e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03999 - K05681 gmx:100802207 835.869