Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03994 ATGGTGATGGCGTGGGAAGATCTAACAGTAGAGCTCCCTAGTAGTAGTAGTAGTGTTCCAAACAAGAAGAAGTTGTTGCTTCATGGGATCACTGGTTTTGCTGAACCTGGTAGCATCATGGCCGTCATGGGTCCTTCTGGCTGTGGCAAAACCACCTTACTCGACTCATTGGCAGGAAGACATCCTACAAATGTTATAGTGACCGGTAGCATTCTAATAAACGGCCGGAAGAATAGAAGCCAGGATTGCAGACAAGTGTCTTATGTAGCTCAAGAGGAACTTTTCTTGGGAACTTTGACTGTAAGAGAAAGCCTCACATACTCTGCAAACATGAGGCTTCCTTCAAAAATGACCAAAGAAGAGATAAATGAAGTGGTGGAAGAAACAATAATGGAAATGGGTTTGGAAGATTGTGCAGATAACAATATTGGGAATTGGCATTTAAGGGGTATTAGTAATGGTGAAAAGAAGAGACTTAGCATTGCTCTTGAGATTTTGACACAACCTCAAGTCTTACTTCTTGATGAACCCACTAGTGGACTTGATAGTGCCTCAGCTTTCTATGTTATCCAAGCTCTAAGCAACATAGCTTGTAATGGAAAGATAGTTATTTGTTCCATTCACCAACCAAGTAGTGAAACTTTTAATCTTTTTGATGATTTGCTTTTGCTCTCATGTGGGGAAACTGTTTATTTTGGAGAAGCAAAGATGGCTCTAAAGTTTTTTGCTGATGCAGGGTTCCCTTGTCCTACTAGAAGAAATCCTTCAGATCATTTCATTTTGTGCATTAATTTGGACTTTGATTTAGTTACCGCATCACTAGCAAGATCGCATTTAAGTCTACCATCAACATCAAATTTAGCAGTAGGCATGAAAACAACAGAGGTTAGAGCAACACTTATTGAGAGTTACAAAAGTTCAGAGCTAATGATCAATGCAAGAAGAAGAATTCAACAACTGAAACCCAATTTAAACACTTGCTGCCATTTCTTTCTGGGGGGTCATTGCGTACACTTTACAGGAAGAACAAGTAACTGA 1038 0.3969 MVMAWEDLTVELPSSSSSVPNKKKLLLHGITGFAEPGSIMAVMGPSGCGKTTLLDSLAGRHPTNVIVTGSILINGRKNRSQDCRQVSYVAQEELFLGTLTVRESLTYSANMRLPSKMTKEEINEVVEETIMEMGLEDCADNNIGNWHLRGISNGEKKRLSIALEILTQPQVLLLDEPTSGLDSASAFYVIQALSNIACNGKIVICSIHQPSSETFNLFDDLLLLSCGETVYFGEAKMALKFFADAGFPCPTRRNPSDHFILCINLDFDLVTASLARSHLSLPSTSNLAVGMKTTEVRATLIESYKSSELMINARRRIQQLKPNLNTCCHFFLGGHCVHFTGRTSN. 346
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03994 345 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 2 322 - -
Seca2g03994 345 SMART AAA_5 36 227 IPR003593 GO:0016887
Seca2g03994 345 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 234 IPR027417 -
Seca2g03994 345 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 10 251 IPR003439 GO:0005524
Seca2g03994 345 Pfam ABC transporter 31 179 IPR003439 GO:0005524
Seca2g03994 345 Gene3D - 6 258 IPR027417 -
Seca2g03994 345 Pfam ABC-2 type transporter 208 263 IPR043926 GO:0140359
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca2g03994 Seca-Chr2 121848183 121853057 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03994 10 212 Calmodulin-binding Proteins AT2G36910 28.302 2.75e-14 72.4