Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03982 ATGGAGGATTGCTTAAGAAGAGGGGTTCATGATTTTAACATGGCTTCAAGAAAAGCTGAAGAAGCTGCTTGGAGACGCTATGAAGCTACTCAGTGGCTAGAAAGCCAAGTGGGTCCTCTTGGCATATCCAACCAACCCACAGAGAGAGAACTTATTTCTTGCTTAAGAAATGGTCTAATTCTTTGCAACGCCATTAACAAGATTCATCCAGGAGCAGTGCCAAAGGTTGTGGATAATCAAGTAGCTTCACAAGCACTTACCTGGGATTCCCAGCCTTTGCCAGCCTATCAGTATTTTGAAAATGTCCGCAACTTTCTGGTTGCAGCGGAAGAATTAAAGCTTCCAGCTTTCGAAGCTTCTGATCTTGAAAGGGATAGTGTAGAAATGGGATCAGCAGCAAAAGTTGTTGATTGCATTCTATCACTTAAATTGTTTCAAGAGATGAAGCTTATGAACAATCAGAATGGATCCAACAAGCACATAAAATCTCCTTTACTTATGAACTCAAACAGTAGAATGCATTTAAGAGCCACAGCTGCATTCCCCTCTGATGCATGTAGGCACTTGGATCTGTCTACAACATTGGACAAAACACCTCCTGTTGAGAGTAATTTCCAGAGACGAGAAGAACTTGTGGAATCACTTGTCAAGCTACTAGTTGACCGGATGTTTGACGCCAAAGAAAATATTGGTGGAAGCATTATTGCTTCTCTTCATAATGAAGACCTGGATCCAATAAAGCTATTTAATCAGATCATGACAAGTTGTGGGGAACAACCACCTATGAAGTTCCCTGAGCTGCCATTGCTACTCAAGAGTGTTATAAAAGAAAGGATTAGCTTACAACCTCATTCCACCTCCACACCCACAGAATCAGATGCTTTGTCTGCTCCTGAAAGTTCCCAGTGTTACAAAGCTTGCCCCGGAAAGTGCACTTGCAATCAAAAGCATCTCTTAGATATGCAGGAAAAAGAACTTCTGGATCTCAAGGCTTTGAAGTTGAAAATTAAGAATGAGTTTGAAGAGATGCAGTCACAGTTTCAGAGATTTTTTTATGATATTGGAAGTCAAATACAGGACATGTCAACCAAAGCTCTTGGGTATCACAGAGTGGTAGAAGAGAATAGGAAACTATACAACATGGTCCAAGATTTGAAAGGCAATATTCGAGTTTACTGCAGAATCAGGCCCTCATTCCAGGCTGAATCCAAGAATGTTATTGATTTCATTGGGGAAGACGGTTCTCTTTTCATTTTAGATCCATCAAAACCACTAAAAGATGGAAGAAAACTTTTTCAGTTTAATCGGGTTTTTGGTCCAACAGCTGGCCAAGATGAGGTTTTTAAGGACACTCAACCATTAATTAGATCCGTGATGGATGGGTACAATGTTTGTATTTTTGCTTATGGACAAACTGGATCTGGAAAGACTTACACTATGAGTGGTCCTTCTGGTGGAACATCTAAGGATGTGGGGATCAATTATCTGGCTCTTAATGATCTGTTTCAAATGTCCAAAGAAAGAAAGGACATTATAACATATGACATTTATGTTCAAATGGTTGAGATTTACAATGAACAAGTAAGAGACCTACTTGCTGAGGACAAAACAGACAATAAATTAGAGATCCGGAGCTGCAATGATGATGGGTTGAGCCTTCCTGATGCTAATTTGCGTTCAGTAAAGTCCACAACTGATGTTATAACCCTCATGAAACTTGGTGAGGTTAATCGTGCTGTCAGTTCCACTGCGATCAACCACAGGAGTAGTCGTTCGCACAGTGTACTTACTGTGCATGTTCATGGCAAAGATACATCTGGGAGCTCCATTCGTAGTTGCCTGCACTTAGTAGACCTTGCTGGAAGTGAAAGAGTAGACAAGTCTGAAGTTACAGGAGAAAGACTAAAGGAAGCACAATTTATTAACAAGTCTCTTTCCTGTTTGGGAGATGTTATCACTGCCCTGGCTCAGAAGAATTCTCACATTCCTTACAGGAACAGCAAACTCACGCTTCTTTTGCAGGACTCCTTAGGTGGACATGCTAAAACATTGATGTTTGCTCACGTGAGTCCGGATGCAGATTCCTTTGGTGAAACAGTGAGTACTCTAAAGTTTGCTCAGAGGGTTTCCACTGTGGAACTTGGGGCAGCCCGTTTGAACAAAGAAAGCAGTGAGGTTAGGCAACTTAAAGAACAGGTTGAGAACCTTAAGCTTGCATTGGCAAATAAGGAAAATCTAAGAGCAGTGTTCAATAGAACTAAAGAACCTCATACTCCATCAGAGAGGCCAATGTTGGTGTCTGAGAAAACTCCATTGCGCCCTCGAAGACTTAGCATTGAGAATTGCAGTGCTGTAAAGACTGATAAACCTGCAAATCCTGAGGATAAAAGTGGAATCAAATCACCTTCCTTGTTACGTCGTTCAAGAAGATTAAGCTTGGAAGGTTCAAGAACTATCAAGAAAGACAGTAGTCTACAACCAAAAGTAGTAACTGATCTAAGCAAAACTTTACAGTATGAGCCACTGTCTCAGCAGAAACATCGACCACAGCAAGATCCAGAAGCAGTGTCAAAGCTAAATGGCCAAATCAGCAACGGAAATTCCAGTGTCAAAGCTCCTCGAAGCCCTACAAACATTTCCTATAACAAGAGGTTGATAAAAGTAGATGGAGGGATCCAAATTCATCCACTTAAACTACCTCAGACACCTGAACCACCAATGCTAGATGCAAATAATGCACACAAAACTGTGCCAAGTGAGCTTGCATCTTGCACTGATTCACAGACAACAAAGGTGACAAGTAGCACAAATGGAAAAGGATCCCATATAAGAAGATCCCTGAGAACAATTGGGAAACTGATTAATGGCCCTGATAAGAGGAGCCAACAAAATGTGGTTGAAGTCAAGTCACCAATTAAGGGCACTAGCCATACAAATCAAGTAAAGTCACCACTAACAGCTGGTGAGAAGACAAGAAGGAGGCAATCTCTAACAGGGATTCAAGCATCAGGGCCAAACAACTCACGCAGGTCTTCACTTGGAGGGAAGCCAGTAGCATATGACAAGGACAGAAATGCTAGAACGCCTCCTCCAGTTCAATCTGACACCAAGACTTCAAAACGGTGGCTATAG 3132 0.4157 MEDCLRRGVHDFNMASRKAEEAAWRRYEATQWLESQVGPLGISNQPTERELISCLRNGLILCNAINKIHPGAVPKVVDNQVASQALTWDSQPLPAYQYFENVRNFLVAAEELKLPAFEASDLERDSVEMGSAAKVVDCILSLKLFQEMKLMNNQNGSNKHIKSPLLMNSNSRMHLRATAAFPSDACRHLDLSTTLDKTPPVESNFQRREELVESLVKLLVDRMFDAKENIGGSIIASLHNEDLDPIKLFNQIMTSCGEQPPMKFPELPLLLKSVIKERISLQPHSTSTPTESDALSAPESSQCYKACPGKCTCNQKHLLDMQEKELLDLKALKLKIKNEFEEMQSQFQRFFYDIGSQIQDMSTKALGYHRVVEENRKLYNMVQDLKGNIRVYCRIRPSFQAESKNVIDFIGEDGSLFILDPSKPLKDGRKLFQFNRVFGPTAGQDEVFKDTQPLIRSVMDGYNVCIFAYGQTGSGKTYTMSGPSGGTSKDVGINYLALNDLFQMSKERKDIITYDIYVQMVEIYNEQVRDLLAEDKTDNKLEIRSCNDDGLSLPDANLRSVKSTTDVITLMKLGEVNRAVSSTAINHRSSRSHSVLTVHVHGKDTSGSSIRSCLHLVDLAGSERVDKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPDADSFGETVSTLKFAQRVSTVELGAARLNKESSEVRQLKEQVENLKLALANKENLRAVFNRTKEPHTPSERPMLVSEKTPLRPRRLSIENCSAVKTDKPANPEDKSGIKSPSLLRRSRRLSLEGSRTIKKDSSLQPKVVTDLSKTLQYEPLSQQKHRPQQDPEAVSKLNGQISNGNSSVKAPRSPTNISYNKRLIKVDGGIQIHPLKLPQTPEPPMLDANNAHKTVPSELASCTDSQTTKVTSSTNGKGSHIRRSLRTIGKLINGPDKRSQQNVVEVKSPIKGTSHTNQVKSPLTAGEKTRRRQSLTGIQASGPNNSRRSSLGGKPVAYDKDRNARTPPPVQSDTKTSKRWL. 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03982 1043 ProSiteProfiles Kinesin motor domain profile. 388 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g03982 1043 FunFam Kinesin-like protein KIN-14L 11 174 - -
Seca2g03982 1043 MobiDBLite consensus disorder prediction 956 1013 - -
Seca2g03982 1043 Gene3D Kinesin motor domain 330 714 IPR036961 -
Seca2g03982 1043 MobiDBLite consensus disorder prediction 751 827 - -
Seca2g03982 1043 FunFam Kinesin-like protein KIN-14A 330 714 - -
Seca2g03982 1043 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 957 IPR027640 GO:0003777|GO:0007018
Seca2g03982 1043 MobiDBLite consensus disorder prediction 1029 1043 - -
Seca2g03982 1043 MobiDBLite consensus disorder prediction 920 943 - -
Seca2g03982 1043 CDD CH_AtKIN14-like 25 144 - -
Seca2g03982 1043 Coils Coil 716 749 - -
Seca2g03982 1043 SMART kinesin_4 386 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g03982 1043 Pfam Calponin homology (CH) domain 25 144 IPR001715 GO:0005515
Seca2g03982 1043 Pfam Kinesin motor domain 394 711 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g03982 1043 Coils Coil 319 346 - -
Seca2g03982 1043 PRINTS Kinesin heavy chain signature 461 482 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g03982 1043 PRINTS Kinesin heavy chain signature 613 631 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g03982 1043 PRINTS Kinesin heavy chain signature 583 600 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g03982 1043 PRINTS Kinesin heavy chain signature 662 683 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g03982 1043 ProSiteProfiles Calponin homology (CH) domain profile. 23 147 IPR001715 GO:0005515
Seca2g03982 1043 SUPERFAMILY Calponin-homology domain, CH-domain 22 154 IPR036872 -
Seca2g03982 1043 MobiDBLite consensus disorder prediction 920 1043 - -
Seca2g03982 1043 Gene3D - 10 167 IPR036872 -
Seca2g03982 1043 SMART ch_5 25 145 IPR001715 GO:0005515
Seca2g03982 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 711 IPR027417 -
Seca2g03982 1043 MobiDBLite consensus disorder prediction 839 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03982 Seca-Chr2 121594199 121603237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03982 376 712 Calmodulin-binding Proteins AT5G65930 43.605 4.40e-71 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03982 K10406 - gmx:100786642 1583.54