Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03973 ATGAGTTGTGATGCCTCATCTGTCAGATTGGAACTGGAGAGGATCAGGGATTGTAGTGGAGCTGTCTTTAATGGTTGCATTTTGCCTGCTCAACAGGTTCTTGAGGAGTTGGTTCACTTAGGAAAGGAAGCAAATTCTGAAGCACAAGTTTTGTTTGATGAACTGAAAGGGATCCCTGAAGATAAACCATATGCAAGTTTTCAAAGGAAGGTAACTTATGCATGCATCTATTCTAGTTCTTCTTTGTACCTTTTGATTGATTACTTGAGGAAAGCTTGTGCAAATGGATGTTGTGCTTTGGTTTTGTCAAAAGTTTTTGTGGTTATGCCTATTGAGATAACCATTATTTCTATAATTCTATTCATTAATGCTGACAAATATTGGGATCTCTATTTTAGTGAGTCACTTGAGCATGACCTCCCGGGCCACATGCTCCGCTATCTCTTTACTTGTAACATATTTATTTATGATGTTTATGACAATGTGACTACATATCCAATTCAAGATGATGTCCTGAATACTGGTGAACTTGACTACGTCAATGGGGAGGTATAG 555 0.3802 MSCDASSVRLELERIRDCSGAVFNGCILPAQQVLEELVHLGKEANSEAQVLFDELKGIPEDKPYASFQRKVTYACIYSSSSLYLLIDYLRKACANGCCALVLSKVFVVMPIEITIISIILFINADKYWDLYFSESLEHDLPGHMLRYLFTCNIFIYDVYDNVTTYPIQDDVLNTGELDYVNGEV. 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03973 184 Coils Coil 184 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03973 Seca-Chr2 121449740 121451428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03973 124 147 Phospholipase D Gene Family (Wang group) AT1G52570 91.667 3.36e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03973 K01115 - gmx:100794849 53.5286