Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03906 ATGATCAATCAGAAGGTTGAAACTGAAGGCAGCTACAGTAATTATGATGCTAAATCTCAGAGTGTGTTTGGAGCAGAGGAATCTGTTTCTAGCCAGCCAGAAAGAACAGGGAGATTGGAATCCAAGAAGAAAATAAAGAAAGTGAGGTCAATAAGGCTTCATAGATTGTCAAGCATGAGATCATCCACCAGAGGTTGGAAACCTCATGATGACAATCTCTCCATTCTCTCATCTGATGGCACAGAAAGTTCAGGGCATCCAACCTCAATTGGAATGGCAGATGGATCACCCAATTACATGAAGGCCACCAGTAGTTCTCATGCAAAGGATGGTTTTCAGAGTACTCAAAGACTTTTCACAAAGAAGAGTTTGACAAGAATGTCTACTTTGAAACTGAAGAAGAATCTGACCAGAAAGTTATCTGGAAGGACTGAACCAAAGAGGAAATTGAAGTCATCAAGATCAATCAAGGTTGCAACTATGAAGGGCTCAAAAGGGAAGCTTTCTGAATCCATGTATGGCATTGATGGCCAGAATAGGAAAAATACAATTGATGCTGGTAACAAATCCCAGAGAGTCCTTACCAGAAGATTAACCTTGAAGCCTGTGAGGATCTTAACAAAAATGTCCACTTTCAAGTCAAAGAATTCTTCCATGGAGAAAGGCCCTTTGATGTCTCAATCTCCAGACTCAAGCTTGCATAAAGCCACATGTTCTTCCACTCTCAAGGATTCCCATTTCAGAGATCACATTGACCTCCCACAAGATGGAAGTGATTCTCAAGTAGTACCAGCTATGAAGGTTTGTACATATAGTTACTGCTCTCTTCATGGCCATCGCCACGGCAATTTGCCTCCACTGAAGCGCTTTGTGTCAATGAGGAGGCGTGTGTTGAAGAGCCAAAAGTCCATGAAAATGGATGGCAGATCAAAGCAGTTTGGTAATGCAAGGAAAGCCACTCAGAAAACCAAAACTGTCCACAGTGAAGATGGCAGCTCTCATTTTCAAAATGTGAAAAAGCTGGCAAGGGACTCATGTGTTAGGCCTCATGACACTCCAGCATCCACAGTTACTGAAGGTGGCACTTCTTTGGGAGAGGATGAAGAAAAATACAATTTCAGATGTAATGCTGAGGTGTTACTGGGAGAAACATCATTTCCACATTTGATAAATTTTGAGGAGTATCTTGGTAATTCTCCTGCAGTTGAAAGCTACACTTCCCTGGCTGTCAAGGAAACAAATATAGAATGTTGCTGCATTGCTACTGAAGAAGAAAAATCTGATCCTGAGGTAACTGAGACAGCAGGGAATGACAAGAATATGGCTGCATGCAAGATGAATGATGAAAGTGTTACTGTGGAATCAACATTAATAGATGTAGCCAAGTTTTCTGGTTCTGATATTGAGACATTGGAGGGAGAAGTAACAACTGAAGGCAAAAATATGGAGCCAGATTATGAAGTGCTGCAGAAGAGTTCTGTAGAGGGAGATCTTAAACCTGCTAGCACTGCTGATGTTAAAATGCAGGAAAGAGATCAGAAATATATAAAAATGTGGCAATTGATGTATAAGCATGCAGTATTAAGCAACACAGGGAAAAGTGAAAATAAGGTGCCCTTGGATGGAAAGGACAAGGAAGGAAGAGGGCAAGATGCTATTGAATTTAATGCAGTAGATAGCTCTTCTTGTGACAATAATTGTGAAACAGATCAGGATATGGATGATGAAAATAAGAATGTAATTGAGCTGGTGCAAAAAGCATTTGATGAAATTCTTCTCCCAGAAGCTGAAGACCTCTCTTCTGATGATCATTTTAAATCTAGAGGCATAGGCTCAAATGAGGTACTCCCAGAAAAGAGTGAAAGTACCACAGAAGAAAGGAATGCCTCAACATCCACTGAATCTCCTAAGGAAGCACAGAGGATGGGGGCTAAACCTGACCAAAGAACACCAAAAAGCTGGAGCAATCTGAAGAAGTTGCTCCTTTTGAAAAGGTTTGTAAAGGCATTAGAGAAGGTAAAAAACATCAACCTACAAAGACCAAGACAATTGCCTTCAGATGCTAACTTTGAAGCAGAAAAAATCTTTCTCAAGCACCAAACAGCAGAAGAGAGAAAAAAAGCTGAGGAATGGATGCTTGACTATGCACTTCAGAAGGTTATTTCTAAACTGGCACCTGCTCAAAGACAAAGAGTGACACTTTTAATAGAAGCTTTTGAAACAGTTCTGCCATTTCAAGATGCTGAAAATGGTTCACAGACTTCTGCAACAGTGGAACCTCAAACTAATCCAATTCAATGCCTTGATAATTCCTCAGGCCAGAGCAAAGAAGAAACAGACAGAGGAAGGGATTATGGTTATTCTGCTAAGATATTGCTTAGAAAAGCATTGTCCTCTCATAATAGTACTATGGAATTTTCAGATAATGCTGGTGATAATCCAATGCCTGAACTGCACAATCCTATTGTGCTCAAAGAAAGATATCTTGAGCATCCTGGGACCAAGACACCCAAGAATATGCCTGCATCTGGAGCCATTGAAGATGATTTGAATGGAAACCGAAGTTCAGCCGACAGTTATGATAATGGGGAGAAGATCTCAATTGACAATGATAATATTTATCATGTAGAGATCGAAGATTCCAGATCACATTCCTTATGTAAGCCAGGTGAAATAATAAGCAGTTGTCATGAGGAGGCTCCTTCCAATGTAATTGCCATTGCCAATGAAGTTCCTGGAGATTTGATATCAAATTTGAATACAGAAAACCCAAATATCAAATCTGATTCAACTGAAAGAGATTTTGAATCCAAGAATGTGATTGGTGATGATAGGGAGGAACTTTCTATGTCGAAAAGTTCACTCCTAAATGGTCTTGTCAGATCACTCAGATCTAATTTGGTTGGTTCAGGAGCACCTTCAAACCTATTAGATGAATCAACAGTGGACAGAACAGAAAGGACTGAAAAAGCTAAGCTGGGAACTGACACTTCTGAAGAGTTACCTACACACCAACAATCTGAAACTCCTAAAAGTGCTGTTGTAGGACCTGAGCCCCAGCCAGAGAAACAGAGCTATGCAGGACTGTGGTTCATGGTGTACAAGCACATGGTATCAGATATGACTGAAAACAATTCCAAGTCACTTAATGATGGGGCAGATGAGAAAGAGTCAGGGTATGAAGGCAGCAGAACAAGAGGAAGTTCCATCACTTATGAAAGTACACATGTGATCGATCAAGATCATTCTGTAACTGACCCAGAAGTTGAACTCCACAAGATTGAAGCCATCAAGATGGTAGAAGAAGCAATTGATTCAATCCTTCCGGATGATCAGGACCATTTACCAGACAGGCAGTCACTCACTCAGAACACAATTTTAGATAACTCAGAACAATCCAACAGGACTGAGAGAATGTACAGTGAAGGTCTGAACCAAAAAGAAGAAAGGATGGAATCTGGAAATGGAATAACTCAAGAAGAAAAACAAGAATCGGCACCAAAGGAGGGAAACAAACCAAACCAGCAATTGTCTAGAAGCTGGAGCAATCTTAGAAAGGTTATCCTGCTTAGGAGATTCATCAAGGCATTAGAAAAAGTAAGGAAATTCAACCCAAGAGGGCCCAGATATCTACCTATAGAGCCTGATTCAGAAGCTGAAAAAGTTAACTTAAGGCACCAAGACATGGAAGAAAGAAAAGGAACAGAAGAATGGATGCTTGATTATGCACTTCGACAGGTTGTTTCCAAATTAACCCCTGCAAGGAAAAGAAAAGTGGAGTTGCTAGTGGAAGCTTTTGAAACAGTCATACCAACCATAAAAAATTGA 3828 0.4036 MINQKVETEGSYSNYDAKSQSVFGAEESVSSQPERTGRLESKKKIKKVRSIRLHRLSSMRSSTRGWKPHDDNLSILSSDGTESSGHPTSIGMADGSPNYMKATSSSHAKDGFQSTQRLFTKKSLTRMSTLKLKKNLTRKLSGRTEPKRKLKSSRSIKVATMKGSKGKLSESMYGIDGQNRKNTIDAGNKSQRVLTRRLTLKPVRILTKMSTFKSKNSSMEKGPLMSQSPDSSLHKATCSSTLKDSHFRDHIDLPQDGSDSQVVPAMKVCTYSYCSLHGHRHGNLPPLKRFVSMRRRVLKSQKSMKMDGRSKQFGNARKATQKTKTVHSEDGSSHFQNVKKLARDSCVRPHDTPASTVTEGGTSLGEDEEKYNFRCNAEVLLGETSFPHLINFEEYLGNSPAVESYTSLAVKETNIECCCIATEEEKSDPEVTETAGNDKNMAACKMNDESVTVESTLIDVAKFSGSDIETLEGEVTTEGKNMEPDYEVLQKSSVEGDLKPASTADVKMQERDQKYIKMWQLMYKHAVLSNTGKSENKVPLDGKDKEGRGQDAIEFNAVDSSSCDNNCETDQDMDDENKNVIELVQKAFDEILLPEAEDLSSDDHFKSRGIGSNEVLPEKSESTTEERNASTSTESPKEAQRMGAKPDQRTPKSWSNLKKLLLLKRFVKALEKVKNINLQRPRQLPSDANFEAEKIFLKHQTAEERKKAEEWMLDYALQKVISKLAPAQRQRVTLLIEAFETVLPFQDAENGSQTSATVEPQTNPIQCLDNSSGQSKEETDRGRDYGYSAKILLRKALSSHNSTMEFSDNAGDNPMPELHNPIVLKERYLEHPGTKTPKNMPASGAIEDDLNGNRSSADSYDNGEKISIDNDNIYHVEIEDSRSHSLCKPGEIISSCHEEAPSNVIAIANEVPGDLISNLNTENPNIKSDSTERDFESKNVIGDDREELSMSKSSLLNGLVRSLRSNLVGSGAPSNLLDESTVDRTERTEKAKLGTDTSEELPTHQQSETPKSAVVGPEPQPEKQSYAGLWFMVYKHMVSDMTENNSKSLNDGADEKESGYEGSRTRGSSITYESTHVIDQDHSVTDPEVELHKIEAIKMVEEAIDSILPDDQDHLPDRQSLTQNTILDNSEQSNRTERMYSEGLNQKEERMESGNGITQEEKQESAPKEGNKPNQQLSRSWSNLRKVILLRRFIKALEKVRKFNPRGPRYLPIEPDSEAEKVNLRHQDMEERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVIPTIKN. 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03906 1275 MobiDBLite consensus disorder prediction 74 91 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 161 184 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 1044 1068 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 849 863 - -
Seca2g03906 1275 SMART CaM_binding_2 624 744 IPR012417 GO:0005516
Seca2g03906 1275 SMART CaM_binding_2 1158 1271 IPR012417 GO:0005516
Seca2g03906 1275 MobiDBLite consensus disorder prediction 599 652 - -
Seca2g03906 1275 Pfam Plant calmodulin-binding domain 1168 1271 IPR012417 GO:0005516
Seca2g03906 1275 Pfam Plant calmodulin-binding domain 640 744 IPR012417 GO:0005516
Seca2g03906 1275 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 744 IPR044681 GO:0005516
Seca2g03906 1275 MobiDBLite consensus disorder prediction 1141 1168 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 921 942 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 214 236 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 927 942 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 1109 1177 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 299 334 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 967 1022 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 998 1013 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 1118 1140 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 750 773 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 1 109 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 750 782 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 834 864 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 1 35 - -
Seca2g03906 1275 MobiDBLite consensus disorder prediction 980 997 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03906 Seca-Chr2 120317755 120322849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03906 67 744 Calmodulin-binding Proteins AT2G38800 28.111 4.45e-42 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03906 - - aprc:113861458 1679.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03906 2 120317755 120322849 Seca2g03906 2 120317755 120322849 ECH