Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03894 ATGGAGGATCCAAAACAGAACATCCAGATCAAAATAGAGGAAGAACAACCTCCCAATCAATTAGTGAATCCTCAACTTGTATCAGCACGAGTGACAGAAAAATTGGCAAGAAATAAGTCCGAGAGGTTCACTTACCTCGTTGCAGCTGTGATGTCTAGCTTTGGTGTCACCTCTATGGTAGTTTTGGTCGTTTATTATAGATTCTCATGGCAAATGGAGGTACCTACCTCTAAGTTTCTTGAGGGGAGAAGCCTCCATGTCCCTGGCTTCCTCGCGCCTCCACCCGCGGCCAAGCAGCGATATCTTCATCTTCGAATAACAACAACCGCGCGCACCACTGTCGTTCCCTGTGCTTGCCTCTCACCGTGTGCTTGTCCTCTTGCAGCGAGCACGATGAGCGTCAAGCAAGCAGGGGAATGGAGGCAGACGAGCGTTCAGCAAGTAAAGGAATGGAGGCGGAGGAACGACGACCAACGATGGACGGGAGTGAAGGAGGACGTGGGAGGACGAGGGAATGATGGAGTGAATTCAGCAGGGGGGAAACATGTTAGAAAATATGATGTGTTAAAGAAAGGTGGGAGTAATGGTGAGAGTTCTAGTCAAAGGAAGGTGAACAGGAAGTCAATTTGTACTGGGAAGAAAAAGATTTTTGAGGAACCTGTGATTGATGAGGTGAATGATATTGAGGGTGGTGATGATGAAGAAAGTGAAAACAGTGTGGGTGATATTTGTTTCTCTTACGGTGAGGAGGAAAGAATGGATAATTTTGATGATGGGTTTGACATGCCCACTGAAGTTGAAGTTCAGCCTGTATCTGTTGTTAGCCCAGTGGGGATGAGGAGGAAGTCAATTCCTCCTAGAAGACCAATTGGTGGTGGCGGGGATGTTGCCCAGAATGCTATTGAAGTTACCCAGGATGTTGCTCATAATGCTGCTAAACTTGGTCAGAATGATGTTCAGACTGTTGTTAATCAAGCTACTCAGTCCACTGGAACCAAGCCTCGCTCTCTCATCACCACACTGTCTCCACTCTCCTCTCCCGTCTCCGTCTGCACCTGCTCCGTCGCGCCGCTCAGTCTCCAGTTTTCGTTCACCTCGCTGCACCGTCGCACTCTGCAGTCTGCTCAGTCTCCCATCTCCGTTCACCTCGCCACACAGTCGCATATAGGCAGCCCAATCGTCGTTCTGTCACCACCATTCGCCAGCGCTGCTCGTCCTGTGCCGTCGTTCGCCGGCGCTGCTCATCCCTCCCTTCTCCGTCACGGCTAA 1269 0.5004 MEDPKQNIQIKIEEEQPPNQLVNPQLVSARVTEKLARNKSERFTYLVAAVMSSFGVTSMVVLVVYYRFSWQMEVPTSKFLEGRSLHVPGFLAPPPAAKQRYLHLRITTTARTTVVPCACLSPCACPLAASTMSVKQAGEWRQTSVQQVKEWRRRNDDQRWTGVKEDVGGRGNDGVNSAGGKHVRKYDVLKKGGSNGESSSQRKVNRKSICTGKKKIFEEPVIDEVNDIEGGDDEESENSVGDICFSYGEEERMDNFDDGFDMPTEVEVQPVSVVSPVGMRRKSIPPRRPIGGGGDVAQNAIEVTQDVAHNAAKLGQNDVQTVVNQATQSTGTKPRSLITTLSPLSSPVSVCTCSVAPLSLQFSFTSLHRRTLQSAQSPISVHLATQSHIGSPIVVLSPPFASAARPVPSFAGAAHPSLLRHG. 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03894 422 MobiDBLite consensus disorder prediction 149 205 - -
Seca2g03894 422 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 13 116 IPR045019 GO:0016491
Seca2g03894 422 MobiDBLite consensus disorder prediction 149 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03894 Seca-Chr2 119904155 119913956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03894 1 73 Chloroplast and Mitochondria Gene Families AT4G25700 49.351 5.55e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03894 K15746 - gmx:100802778 101.679