Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03892 ATGGGGATGGCTGCAGCAGAGTCACAGTTTCATGTATTGGCTGTTGATGACAGCATCATAGATAGGAAGCTTATTGAGAGGCTTCTCAGAACCTCTTCCTATCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTCTGGGCTTGCATGAGAATGATGAGAGCAACCCAAATACACCATCTGTTTCTCCTAATAATCATCAGGAGGTGGAAGTGAACCTTGTTATAACAGACTACTGTATGCCTGGCATGACAGGCTATGATTTGCTTAAGAAAATCAAGGTATGCTTTGGTTTCTATTCCTGTCTCATCTATCTTTTAACCATTATATTCTCCACTTTTATCAGTCTTTGTGGTTAA 366 0.4016 MGMAAAESQFHVLAVDDSIIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLHENDESNPNTPSVSPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKVCFGFYSCLIYLLTIIFSTFISLCG. 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03892 121 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 96 IPR045279 GO:0009736
Seca2g03892 121 Pfam Response regulator receiver domain 12 97 IPR001789 GO:0000160
Seca2g03892 121 SUPERFAMILY CheY-like 9 110 IPR011006 -
Seca2g03892 121 ProSiteProfiles Response regulatory domain profile. 11 121 IPR001789 GO:0000160
Seca2g03892 121 Gene3D - 2 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03892 Seca-Chr2 119830108 119832361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03892 1 110 Response Regulator Gene Family AT3G57040 70.270 6.20e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca2g03892 Response_reg 3.2e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03892 K14492 - twl:119988302 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03892 2 119830108 119832361 Seca2g03892 2 119830108 119832361 ECH