Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03862 ATGGTTAACAACAAGAATAAGGAGAGAGAGCCCGAGTATTACTTGGATCATAGCAATGAGGAAGATGAAGAGGATGTAGACTCTGTCAATTACGAGAGTGAGAATAGTAATAATGAGGGTGGCAGTGACTATGAGAGGCATCGTAGGTCACAACATGGTTTTTTCGCAGCTCAACAATGGCCTCAAAGTTATAGAGAGGCCATTGATTCTTTCACAATTGCTGCAGCTCCAAATCTTGGATCAGTTCTACGGGCACCGAGTGTTATTTACTCAAGCTTTGTTGGTCATTCAAAGAGTTACTTAGAACACGATGGAAGGACTCCATTTTTATCTGGTCATGAGGTTAGTAGTCAAACTCAAGAAGGGATCGGGACAAGACAATCAACCTGGTGGGAGAAAGCTTCAATTCAAATGCAAATTCCTGAAGAATTACCCATTGGTTATGGATGTAGCTTCACTCAAACAATATTTAATGGGATTAATGTGATGGCTGGAGTTGGCCTTCTATCTACACCTTATACGGTGAAACAAGCTGGGTGGGCGAGTATGCTGGTGATGCTTCTTTTTGCAGTTGTTTGTTGTTACACGGCAGACCTTATGAAACACTGCTTTCAAAGCAAAGAAGGGATCTATAGCTACCCTGATATAGGAGAAGCTGCATTTGGAAAATATGGTCGAGTTATTATATCAGTAAGCATATGTTTGGTTTTGAATTCATATTGTGTGGAATTTATCATCCTGGAAGGAGATAACCTTAGTGGGTTGTTTCCTGGAACATCCTTGCATTGGGGAAGTTTGCACTTAGACTCCAAACACTTGTTTGCAGTTTTGACTGCACTTATTATTCTCCCAACTGTTTGGCTGAAGGATCTTCGAATAATCTCCTATCTCTCAGCTGGAGGGGTTGTTGCTACAACATTGATTACTATGTGTGTGTTTATTGTTGGTACATCAGATGATGTTGGATTCCATCAAACTGGTCCTTTGTTGAATTGGAGTGGGGTTCCATTTGCTTTTGGTGTCTTTGGGTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATTTACCAATCTATGGCTGACAAAAGAGAATTTACTAAGGCAGTAGTGACATGTTTTATTTTGTGCGTGTTGATATATGGAAGTGTTGCGGTCATGGGATTTCTCATGTTTGGTGAAGGGACTATGTCTCAGATAACATTGAATCTTCCACTAAATGCATTTGCTTCTAAAGTTGCCTTGTGGACAATATTTACCTTTTCTTTAATTTTAAACAAATATGCTTTGATGATGAACCCACTTGCAAGGAGTGTTGAGGAATTGCTTCCTCATAGAATCTCAAGTACAAACTGGTGTTTCATTCTTCTTAGAACAGCACTGGTTATATCCACAGTTTGTGCTGCTTTTCTTATTCCATTTTTTGGGCTCGTGATGGCTTTAATTGGTTCTCTCCTAAGTGTACTTGTGGCAGTGATTTTGCCAGCTCTATGTTTTCTGAAAATTGTGGGGAAAAAAGCAACAAATACACAGGTTGCTCTAAGTGTCATAATTGCTGCCTGGGGAATCACCAGTGCTTTCTTTGGAACATATTCATCTGTATTAAAGATCATGCAAAAATCCTAA 1623 0.3949 MVNNKNKEREPEYYLDHSNEEDEEDVDSVNYESENSNNEGGSDYERHRRSQHGFFAAQQWPQSYREAIDSFTIAAAPNLGSVLRAPSVIYSSFVGHSKSYLEHDGRTPFLSGHEVSSQTQEGIGTRQSTWWEKASIQMQIPEELPIGYGCSFTQTIFNGINVMAGVGLLSTPYTVKQAGWASMLVMLLFAVVCCYTADLMKHCFQSKEGIYSYPDIGEAAFGKYGRVIISVSICLVLNSYCVEFIILEGDNLSGLFPGTSLHWGSLHLDSKHLFAVLTALIILPTVWLKDLRIISYLSAGGVVATTLITMCVFIVGTSDDVGFHQTGPLLNWSGVPFAFGVFGFCFAGHSVFPNIYQSMADKREFTKAVVTCFILCVLIYGSVAVMGFLMFGEGTMSQITLNLPLNAFASKVALWTIFTFSLILNKYALMMNPLARSVEELLPHRISSTNWCFILLRTALVISTVCAAFLIPFFGLVMALIGSLLSVLVAVILPALCFLKIVGKKATNTQVALSVIIAAWGITSAFFGTYSSVLKIMQKS. 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03862 540 Gene3D Amino acid/polyamine transporter I 149 538 - -
Seca2g03862 540 PANTHER OS05G0424000 PROTEIN-RELATED 153 521 - -
Seca2g03862 540 MobiDBLite consensus disorder prediction 1 46 - -
Seca2g03862 540 Pfam Transmembrane amino acid transporter protein 151 532 IPR013057 -
Seca2g03862 540 MobiDBLite consensus disorder prediction 1 16 - -
Seca2g03862 540 FunFam Amino acid transporter AVT1A 148 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03862 Seca-Chr2 118697582 118706561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03862 3 475 Amino Acid or Auxin Permease AAAP Family AT2G41190 58.125 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03862 K15015 - gmx:100790344 702.975