Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03857 ATGGCATTTGATGTAGAATACGCACGATGGTTAGAAGAACATAATAGGCACACCAATGAGCTGAGGGCTGCTATAAATTCTCATGCTGGAGATATTGAACTTCGAACCATTGTTGACAATTTCATGACACAATTTGAAGATATATTCAGGCTGAAAGGTATTGCAGCAAAAGCTGATGTTTTCCACATTCTATCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCTGAACTTCTCAAGCTTCTTGTAAGTCAATTGGAGCCTTTAACTGAGCAACAATTGATGGGAATCTACAACTTGCAACAGTCATCCCAACAAGCTGAAGATGCTCTGTCCCAAGGAATGGATGCATTGCAGCAATCACTATCTGAGACATTGGCTAATGGTTCACCCAGCCCATCAGGCTCATCAGGAAATGTAGCAAACTATATGGGGCAAATGGCTATGGCCATGGGAAAACTTGGTACCCTCGAAGGGTTTCTTCGCCAGGCTGATAATCTGCGGCAGCAAACATTACAACAAATGCTTAGGATATTAACAACCAGGCAATCAGCTCGAGCACTTCTCGCCATAAGCGATTACTTCTCCCGCCTGCGAGCCCTGAGTTCTCTATGGCTTGCCCGGCCAAGGGAATGA 663 0.4495 MAFDVEYARWLEEHNRHTNELRAAINSHAGDIELRTIVDNFMTQFEDIFRLKGIAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVSQLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPSPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE. 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03857 220 PANTHER TRANSCRIPTION FACTOR TGA9 1 220 - -
Seca2g03857 220 ProSiteProfiles DOG1 domain profile. 1 217 IPR025422 GO:0006351|GO:0043565
Seca2g03857 220 Pfam Seed dormancy control 17 93 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03857 Seca-Chr2 118517237 118519678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03857 1 220 bZIP Transcription Factor Family AT5G06950 76.818 4.63e-119 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03857 K14431 - gmx:778136 399.823