Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03855 ATGGAGTTTGAATCTGAGGTTGCGGCCTATAAATTTTATAATGAGTACAGTAGAAGAATTAGGTTTGGTATTCGTCGAGAATATGGAAATAAAAGCAAAAAAGATGGAATTCTAACTTCAAGAAGGTTCTCATACTTCAAAGAGGGTAAACAGGGCGTTGACAAACGAGACCATTTGACAAAAGAGCCTAGAGCAGAAACTAGAACAGGATGTGAAACACGTATGGTTATTTCACTTGATCAAAAGATTGGGAAATACAAGGTTATTGACTTTGTAGCTCAACACAATCATCCTCTTCAATCGCCAGAATATGTTCATATGATTCGCTCCTATCGACACATGTTTGAGTCACAAGCATCACAAATTGTATTGGCAGATGAATCTGGATTGAAACCAAAAGATTTTCACGAATATGTATCCAAGCAAGTTGGTGGAATAGACGGTGTTGGTTATACAAGACAAGATCATAAGAATTACCTCCGAACTAAAATAAAACAGTCTTTAAGGTATGGTGAAGTGGGTGCATTATTTATGTACTTCAAACAACAAAGTGAAAATCCTTCATTCTTTTATCACTTTCAAATGGATGTTGAAGAGCAAATAACAAATATATTTTGGGAAAATGCACAAATGAAAAATGATTATGGGTACTTTGGTGATATCATCACTTTTGATACCACTTACAAGACAAATAAGGATTATTGA 705 0.3461 MEFESEVAAYKFYNEYSRRIRFGIRREYGNKSKKDGILTSRRFSYFKEGKQGVDKRDHLTKEPRAETRTGCETRMVISLDQKIGKYKVIDFVAQHNHPLQSPEYVHMIRSYRHMFESQASQIVLADESGLKPKDFHEYVSKQVGGIDGVGYTRQDHKNYLRTKIKQSLRYGEVGALFMYFKQQSENPSFFYHFQMDVEEQITNIFWENAQMKNDYGYFGDIITFDTTYKTNKDY. 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03855 234 Pfam FAR1 DNA-binding domain 11 100 IPR004330 -
Seca2g03855 234 PANTHER OS01G0519700 PROTEIN 1 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03855 Seca-Chr2 118468901 118469605 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g03855 FAR1 2.3e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03855 - - tpra:123905213 377.096