Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03796 ATGGCTTCAAGACCCATTGTTCCACAACAGCCCAGAGATGTGATAGGTGACGCAGCCTTGGGGGCAGGGAAGCAGCAGAAGAAGAACGGTGCAGCAGATGGAAGGAACCGTAAAGCACTTGGTGATATTGGAAACTTGGTCACTGTAAGAGGAGTTGAGGTCAAGCCTAATCGTCCCATCACAAGGAGTTTCTGTGCCCAACTACTTGCCAATGCACAAGCTGCAGCTGCTGCTGAAAATAACAAGAAACAGGCTTGTCCCAATGTGGCTGGGCCTCCTCCTGTTGTTGAAGGAGTTGCAGTGGCTAAAAGAGTGGCCCCCAAACCAGGTCAGAAGAAAGTCACAACAAAACCAAAGCCTGAGGAAGTCATTGAAATAAGTCCAGACGATGCCAACTCCAAGAAGAAATCACACACTTATTCTTCTGTGCTCACAGCTCGAAGCAAGGTATTAAAAACAATCTCAAGTTCTTGTGATTTTCTATTGCAGGCAGCATGTGGTTTGACTAATAAACCTAAAGAGATTATTGACATTGATGCTGCTGACACTGGCAATGAGCTTGCTGCTGTGGAATATATTGAAGACATTTACAAGTTCTATAAGATGGTTGAGAATGAAAGCCGTCCCCATGACTACATGGACTCACAACCTGAGATCAATGAGAGGATGAGAGCTATACTTGTTGATTGGCTGATAGATGTACACAGCAAATTTGACCTTTCACTTGAAACCCTTTATTTGACCATCAACATAGTTGATAGATTCCTAGCAGTTAAGACTGTGCCAAGAAGGGAACTGCAATTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAGTATGAAGAAATCTGGCCCCCAGAGGTTAATGACTTTGTCTGCCTCTCAGACAGAGCTTACACTCATGAACAGATACTTTTCATGGAGAAAATCATATTGGGGAAGCTAGAATGGACCTTGACTGTGCCTACCCCTTTTGTTTTCCTAGTTCGTTTTATCAAGGCATCAGTGCCAGATGAGGCAGTGAGTATTATTTTTATTATGGAAAACATGGCACATTTCCTTTCTGAATTGGGGATGATGCATTATGCCACCTTAATGTATTGTCCATCAATGGTTGCTGCCTCAGCAGTCTATGCTGCTAGATGCACTCTGAATAAGAGCCCTATTTGGAATGAGACACTTAAGCAGCACACTGGTTACTCTGAAGAGCAACTTATGGATTGTGCTAGACTACTGGTGAGCTTGCACTCCACAGTTGGGAATGGGAAGCTTAAGGTTGTGCATAGAAAGTACTCTGATCCTGAGAGAGGATCTGTTGCAGTGCTTCCACCAGCTAAAAATCTTCTGTCTGAAGGGAAGAGCCTCTAA 1368 0.4423 MASRPIVPQQPRDVIGDAALGAGKQQKKNGAADGRNRKALGDIGNLVTVRGVEVKPNRPITRSFCAQLLANAQAAAAAENNKKQACPNVAGPPPVVEGVAVAKRVAPKPGQKKVTTKPKPEEVIEISPDDANSKKKSHTYSSVLTARSKVLKTISSSCDFLLQAACGLTNKPKEIIDIDAADTGNELAAVEYIEDIYKFYKMVENESRPHDYMDSQPEINERMRAILVDWLIDVHSKFDLSLETLYLTINIVDRFLAVKTVPRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYTHEQILFMEKIILGKLEWTLTVPTPFVFLVRFIKASVPDEAVSIIFIMENMAHFLSELGMMHYATLMYCPSMVAASAVYAARCTLNKSPIWNETLKQHTGYSEEQLMDCARLLVSLHSTVGNGKLKVVHRKYSDPERGSVAVLPPAKNLLSEGKSL. 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03796 455 PIRSF Cyclin_A_B_D_E 1 455 IPR046965 GO:0016538|GO:0044772
Seca2g03796 455 SMART Cyclin_C_2 322 445 IPR004367 -
Seca2g03796 455 PANTHER CYCLINS 138 433 IPR039361 -
Seca2g03796 455 FunFam G2/mitotic-specific cyclin-1 316 440 - -
Seca2g03796 455 SUPERFAMILY Cyclin-like 185 319 IPR036915 -
Seca2g03796 455 ProSitePatterns Cyclins signature. 224 255 IPR006671 -
Seca2g03796 455 SMART cyclin_7 229 313 IPR013763 -
Seca2g03796 455 SMART cyclin_7 326 414 IPR013763 -
Seca2g03796 455 Gene3D - 209 314 - -
Seca2g03796 455 SUPERFAMILY Cyclin-like 323 447 IPR036915 -
Seca2g03796 455 MobiDBLite consensus disorder prediction 1 38 - -
Seca2g03796 455 Pfam Cyclin, N-terminal domain 195 319 IPR006671 -
Seca2g03796 455 FunFam G2/mitotic-specific cyclin 208 315 - -
Seca2g03796 455 Pfam Cyclin, C-terminal domain 322 444 IPR004367 -
Seca2g03796 455 CDD CYCLIN_AtCycB-like_rpt2 322 444 - -
Seca2g03796 455 CDD CYCLIN_AtCycB-like_rpt1 175 317 - -
Seca2g03796 455 Gene3D - 315 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03796 Seca-Chr2 117154730 117157021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03796 1 454 Core Cell Cycle Gene Families AT4G37490 53.402 5.70e-147 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03796 K21777 - gmx:547919 656.366