Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03789 ATGCCTGAACCAATGCTTAATCCTCACCCGCCGGAGCCGCCGCAGGCATCCGATGTTGCCTTCGACGAATTCTCCGCCGAGTTCCAGAACCTTCCCATCCCCTCCATGGACTCTCTCTTCCACAACGACAATTTCCCATCTGAACCCTTCCCTTCCGATCTGGAGGAATTCGCCATGGATTTCGGCGAAAATGGCGACTTCGACATCACCTTCGATGACTTTGACGCCTTCTGCATCCCCTCCGACGCCGAAGATTTCCTTCTCCCAGATGCATGCAACCCTACCGGAGCTTCAATTTCGCTGTTGATCGACGATCGTGACGATTCCTCCGCGAAGAATTCCGATTACGGAGTCGTTAATTTCGATTCGCTGGAATCCGGCGCTTCTGCGGTTTCCGGCGACCGAAGCTCCGGCGTTTCTAGGTTTCTCAATTCGGAGACGGTTTCGGCGGATAATTTGTGCAAACAGGATTCGCCTAGCTCCGGTGATGTTAAAGTTTCAAGCTGTCAGTCGCCAGAGTTTGAGCACTGCGACCGGGAAGAGTCTTCGAATGGACCGGTTTCGTCTCAGGGTTCGGGCAATGGTGGGTCGGGTGTATATGAAGCTATGAACTCGCCCTCACCTGATTCTGGCCGTTATGAGAGGGATATTTCATCTTCTCATGCACATGCAGTTCAAGATAAAGATATAAAATTGGAGGAAAATGGCAAAGGTTGTGATCTAAAGAGGAAAAAAGAGCATAGTGAAGGAAGTGCTGAGAATAGAACTGCCAAATACAGGAAGTCCTCCTCGGTGGAAAACAAGATCCAACAACAATCTCAATCTGGTGTTAATGACGTTGATGATGAGGACGAGAAGAGGAAGGCCAGGTTAATGAGGAATAGGGAAAGTGCACAGCTTTCAAGGCAGAGGAAAAAGCATTATGTGGAGGAGCTTGAGGAGAAGGTGAGGTCAATGCATTCCACAATTACTGATCTGAGTAGTAAGATATCCTATGTCATGGCTGAGAATGCAACTCTTAGACAGCAATTGGGTGCTGGTGTGATGTGTCCTCCTCCTCCACCAGCTCCAGGGATGTACCCTCATCCTCCCATGCCACCCATGCCTTATCCTTGGATGCCATGTGCTCCCTATGTTGTTAAGCCTCAAGGGTCTCAGGTTCCTTTGGTTCCCATTCCTAGATTGAAGTCTCAGCAATCAGCTTCAGCCTCCAAGAGCAAAAAGTCTGAGAGTAAGAAGACTGAGGTGAAAACTAAGAAGGTTGCCAGCATTAGTTTGTTGGGTTTATTTTTCTTTATCATGCTTTTTGGTGGACTCGTTCCTCTGGTGGATGTTAATTTTGGAGGTTTAGTGGATAACTTTCCTGGTAGGTCTAGCTATGTTAGTGATAAGTTTTATGGTCAGGGTGGAGGGAAGGTTTGGCCTGTAAATGGTCATAAGAATGGATCTGAAAGGTTTAGTATTTCTGATAGAACTAATTATGACAGAGGCCGGAAACTAGAACAAACGCATGAACAGCAAGATCCTCATAGGAGTAATTCCAGTGAGCCTCTCACTGCTTCTTTGTATGTTCCTAGGAATGATAAACTGGTGAAGATTGATGGAAACTTGATAATCCATTCTATAATGGCCAGTGAGAAAGCCATGGCATCTCAAACTGCTAAGGCAAAGAAGGACAAGAGTGAAACTGGTTTGGCCATTCCTAAGGATTGGGATTCTGCATTAGCTATTCCTGAAGTTGGAAGAAATAGAGGTCAACATCCACATGTGTATAGGGTTCCTCCTAAACAGAGGAGGGCTCTTGGCTCTGGTTCAACTGAAACTTTGAAGGACCATATGAAGTCCTCTGCAACTAATGGTAAAATGCAGCAGTGGTTCCGTGAAGGCCTTGCAGGGCCAATGCTAAGTTCTGGCATGTGCACTGAGGTTTTCCAGTTTGATGTTTCTCCTACTCCTGGAGCTATAGTTCCAGCAACATCAGTAACCAATATTTCTACTGAAAGGCGTCAGAATGCTACCACTGTCAACAAGAGCAGGAATAGAAGAATCCTACACAGGCTCCCTGATCCACTTCCTGTGTCCAGTCTGAACTTAACTGAAGAACGTGCAAGAAATTCGCAGAAAGACCACCTCCATGGTAATAAATCATCTATGGTGGTTTCCGTGCTTGTTGATCCTAAAGAGGCAGGAGACGGTGATGTTGATGGCATGATGGCACCAAAGTCGCTCTCTCGGATTTTCGTGGTTGTGCTTATGGATAGTGTCAAGTATGTCACTTACTCATGTGGTCTTCCGCGTGCTTCTCCCCCACTCTGGTGA 2319 0.4679 MPEPMLNPHPPEPPQASDVAFDEFSAEFQNLPIPSMDSLFHNDNFPSEPFPSDLEEFAMDFGENGDFDITFDDFDAFCIPSDAEDFLLPDACNPTGASISLLIDDRDDSSAKNSDYGVVNFDSLESGASAVSGDRSSGVSRFLNSETVSADNLCKQDSPSSGDVKVSSCQSPEFEHCDREESSNGPVSSQGSGNGGSGVYEAMNSPSPDSGRYERDISSSHAHAVQDKDIKLEENGKGCDLKRKKEHSEGSAENRTAKYRKSSSVENKIQQQSQSGVNDVDDEDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTITDLSSKISYVMAENATLRQQLGAGVMCPPPPPAPGMYPHPPMPPMPYPWMPCAPYVVKPQGSQVPLVPIPRLKSQQSASASKSKKSESKKTEVKTKKVASISLLGLFFFIMLFGGLVPLVDVNFGGLVDNFPGRSSYVSDKFYGQGGGKVWPVNGHKNGSERFSISDRTNYDRGRKLEQTHEQQDPHRSNSSEPLTASLYVPRNDKLVKIDGNLIIHSIMASEKAMASQTAKAKKDKSETGLAIPKDWDSALAIPEVGRNRGQHPHVYRVPPKQRRALGSGSTETLKDHMKSSATNGKMQQWFREGLAGPMLSSGMCTEVFQFDVSPTPGAIVPATSVTNISTERRQNATTVNKSRNRRILHRLPDPLPVSSLNLTEERARNSQKDHLHGNKSSMVVSVLVDPKEAGDGDVDGMMAPKSLSRIFVVVLMDSVKYVTYSCGLPRASPPLW. 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03789 772 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 284 344 IPR004827 GO:0003700|GO:0006355
Seca2g03789 772 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 62 770 - -
Seca2g03789 772 MobiDBLite consensus disorder prediction 214 262 - -
Seca2g03789 772 MobiDBLite consensus disorder prediction 151 168 - -
Seca2g03789 772 SUPERFAMILY Leucine zipper domain 286 344 IPR046347 GO:0003700|GO:0006355
Seca2g03789 772 SMART brlzneu 282 346 IPR004827 GO:0003700|GO:0006355
Seca2g03789 772 MobiDBLite consensus disorder prediction 279 302 - -
Seca2g03789 772 MobiDBLite consensus disorder prediction 500 520 - -
Seca2g03789 772 MobiDBLite consensus disorder prediction 151 302 - -
Seca2g03789 772 MobiDBLite consensus disorder prediction 395 415 - -
Seca2g03789 772 Coils Coil 309 329 - -
Seca2g03789 772 Gene3D - 281 346 - -
Seca2g03789 772 CDD bZIP_HY5-like 287 338 - -
Seca2g03789 772 MobiDBLite consensus disorder prediction 183 204 - -
Seca2g03789 772 FunFam bZIP transcription factor 49 285 347 - -
Seca2g03789 772 MobiDBLite consensus disorder prediction 263 277 - -
Seca2g03789 772 Pfam bZIP transcription factor 285 344 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03789 Seca-Chr2 117017472 117020830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03789 26 770 bZIP Transcription Factor Family AT2G40950 49.342 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca2g03789 bZIP_1 1.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03789 K25783 - gmx:100101871 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03789 2 117017472 117020830 Seca2g03789 2 117017472 117020830 ECH