Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03777 ATGTTGTTTGACATAATTCTCGGAATTGCTCGTGGGCTACTACATCTTCACCAAGACTCAAGACACAGAGTAATTCACAGAGATTTAAAAACCAGCAACATTCTTCTAGATGGGGAGATGCAACCAAATATTTCAAACTTTAGAATGAGAAGCGGTGGATACATGTCTCCTGAATATGCATTGGATGGAAATTTCTCAACCAAATCGGATATTTGCAGCTTTGGTGTAATGTTGCTAGAGATTATCAGTGGGAAAAAGAACACGGGATTCTATCAGTCTAAAGCAATTTCAAGCCTTTTGGGTTATGTGCGTTTCATCCATTGCTCACATTTTTTTCTTTTTCAACTTTAA 351 0.3732 MLFDIILGIARGLLHLHQDSRHRVIHRDLKTSNILLDGEMQPNISNFRMRSGGYMSPEYALDGNFSTKSDICSFGVMLLEIISGKKNTGFYQSKAISSLLGYVRFIHCSHFFLFQL. 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03777 116 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g03777 116 FunFam Os07g0541700 protein 1 58 - -
Seca2g03777 116 Pfam Protein kinase domain 4 86 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g03777 116 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 100 - -
Seca2g03777 116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 24 36 IPR008271 GO:0004672|GO:0006468
Seca2g03777 116 SUPERFAMILY Protein kinase-like (PK-like) 3 93 IPR011009 -
Seca2g03777 116 Gene3D Transferase(Phosphotransferase) domain 1 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03777 Seca-Chr2 116667795 116671366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03777 3 103 Receptor kinase-like Gene Family AT4G05200 50.847 7.27e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca2g03777 Pkinase 1.3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03777 - - tpra:123882048 155.221